CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000006541
(
Myotis lucifugus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSMLUG00000006541
T62063_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000005976
YTH
462
533
LLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPGTSDTE
Links
Other
YTH
family RBPs
Other
Myotis lucifugus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSACAG00000016837
Anolis carolinensis
ENSACAG00000016837
N
0.725
ENSOANG00000005053
Ornithorhynchus anatinus
ENSOANG00000005053
N
0.833
ENSOCUG00000008723
Oryctolagus cuniculus
ENSOCUG00000008723
N
0.736
ENSPCAG00000016282
Procavia capensis
ENSPCAG00000016282
N
0.736
ENSPPYG00000018626
Pongo pygmaeus
ENSPPYG00000018626
N
0.736
XR_024462.1
Pan troglodytes
ENSPTRG00000030993
N
0.736
ENSPVAG00000002740
Pteropus vampyrus
ENSPVAG00000002740
N
0.736
Ythdf3
Rattus norvegicus
ENSRNOG00000010084
N
0.736
Ythdf2
Rattus norvegicus
ENSRNOG00000010892
N
0.778
ENSSARG00000007626
Sorex araneus
ENSSARG00000007626
N
0.736
ENSTBEG00000005747
Tupaia belangeri
ENSTBEG00000005747
N
0.736
YTHDF3
Taeniopygia guttata
ENSTGUG00000011243
N
0.725
ENSTRUG00000007870
Takifugu rubripes
ENSTRUG00000007870
N
0.703
ENSTSYG00000009117
Tarsius syrichta
ENSTSYG00000009117
N
0.736
ENSTTRG00000014564
Tursiops truncatus
ENSTTRG00000014564
N
0.736
ENSVPAG00000008104
Vicugna pacos
ENSVPAG00000008104
N
0.736
ythdf3
Xenopus tropicalis
ENSXETG00000021659
N
0.714
Ame_R018798
Ailuropoda melanoleuca
Ame_R018798
N
0.736
Ythdf3
Mus musculus
ENSMUSG00000047213
N
0.736
ENSMODG00000008255
Monodelphis domestica
ENSMODG00000008255
N
0.847
ENSMMUG00000006729
Macaca mulatta
ENSMMUG00000006729
N
0.736
YTHDF3
Bos taurus
ENSBTAG00000018557
N
0.736
ENSCAFG00000007215
Canis familiaris
ENSCAFG00000007215
N
0.736
ENSCHOG00000010194
Choloepus hoffmanni
ENSCHOG00000010194
N
0.736
YTHDF3
Callithrix jacchus
ENSCJAG00000009217
N
0.861
ENSCPOG00000002961
Cavia porcellus
ENSCPOG00000002961
N
0.736
ythdf3
Danio rerio
ENSDARG00000057939
N
0.725
Ythdf3
Dipodomys ordii
ENSDORG00000014699
N
0.736
ENSETEG00000007144
Echinops telfairi
ENSETEG00000007144
N
0.736
YTHDF1
Felis catus
ENSFCAG00000008917
N
0.750
ENSG00000185728
Homo sapiens
ENSG00000185728
N
0.736
Q5ZLM1_CHICK
Gallus gallus
ENSGALG00000015505
N
0.725
LOC776373
Gallus gallus
ENSGALG00000019473
N
0.725
ENSGGOG00000027681
Gorilla gorilla
ENSGGOG00000027681
N
0.736
ENSLAFG00000016052
Loxodonta africana
ENSLAFG00000016052
N
0.736
ENSMEUG00000011285
Macropus eugenii
ENSMEUG00000011285
N
0.725
ENSMGAG00000011168
Meleagris gallopavo
ENSMGAG00000011168
N
0.725
ENSMICG00000009379
Microcebus murinus
ENSMICG00000009379
N
0.736
AAH81017
Xenopus laevis
AAH81017
N
0.714