AAH81017 (Xenopus laevis)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 AAH81017 T62586_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAH81017 YTH 450 540

Links

Other YTH family RBPs
Other Xenopus laevis RBPs

148 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.978
LOC776373 Gallus gallus ENSGALG00000019473 N 0.978
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.978
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.978
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.978
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.978
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.978
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.978
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.978
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.967
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.967
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.967
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.967
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.967
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.967
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.967
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.967
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.967
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.967
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.967
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.967
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.967
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.967
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.967
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.967
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.967
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.967
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.967
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.967
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.967
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.967
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.967
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.967
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.967
ythdf3 Danio rerio ENSDARG00000057939 N 0.956
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.934
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.923
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.923
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.923
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.923
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.923
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.923
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.923
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.923
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.923
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.923
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.923
LOC100060217 Equus caballus ENSECAG00000019475 N 0.923
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.923
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.923
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.923
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.923
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.912
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.912
AAH60445 Xenopus laevis AAH60445 N 0.912
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.912
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.912
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.912
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.912
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.912
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.912
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.912
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.901
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.901
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.901
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.901
YTHDF1 Homo sapiens ENSG00000149658 N 0.901
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.901
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.901
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.890
YTHDF2 Felis catus ENSFCAG00000012446 N 0.890
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.890
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.890
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.890
YTHDF2 Homo sapiens ENSG00000198492 N 0.890
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.890
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.890
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.890
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.890
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.890
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.890
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.890
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.890
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.890
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.890
LOC100070667 Equus caballus ENSECAG00000023108 N 0.890
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.890
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.890
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.890
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.890
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.890
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.890
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.890
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.890
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.890
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.890
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.890
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.890
LOC419583 Gallus gallus ENSGALG00000000959 N 0.890
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.890
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.890
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.890
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.879
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.879
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.879
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.879
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.879
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.879
ythdf1 Danio rerio ENSDARG00000016447 N 0.879
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.879
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.879
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.868
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.868
AAH78013 Xenopus laevis AAH78013 N 0.868
yth2 Danio rerio ENSDARG00000014498 N 0.857
AAH68959 Xenopus laevis AAH68959 N 0.857
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.857
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.857
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.857
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.857
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.846
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.802
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.791
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.791
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.769
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.769
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.758
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.758
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.747
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.747
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.736
PHUM167190 Pediculus humanus PHUM167190 N 0.736
62837 Helobdella robusta 62837 N 0.736
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.725
152141 Helobdella robusta 152141 N 0.725
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.725
Smp_040460 Schistosoma mansoni Smp_040460 N 0.714
AGAP003817 Anopheles gambiae AGAP003817 N 0.714
ENSMLUG00000006541 Myotis lucifugus ENSMLUG00000006541 N 0.714
GL21952 Drosophila persimilis FBgn0159545 N 0.714
GK12904 Drosophila willistoni FBgn0214913 N 0.714
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.714
AAEL005544 Aedes aegypti AAEL005544 N 0.703
ENSMMUG00000029888 Macaca mulatta ENSMMUG00000029888 N 0.703
GG12295 Drosophila erecta FBgn0104586 N 0.703
GE10748 Drosophila yakuba FBgn0228591 N 0.703
Sjc_0086280 Schistosoma japonicum Sjc_0086280 N 0.703
GF18592 Drosophila ananassae FBgn0095610 N 0.703