TvY486_1003180 (Trypanosoma vivax)
CCCH ZF,CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR000571
IPR001878
IPR000504 		TvY486_1003180 T00024_0.6 EuPathDB (2010-Sep-21)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TvY486_1003180 CCCH ZF 2 27
TvY486_1003180 RRM 72 126
TvY486_1003180 CCCH ZF 147 163
TvY486_1003180 CCHC ZF 221 238

Links

Other CCCH ZF,CCHC ZF,RRM family RBPs
Other Trypanosoma vivax RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29682.m000595 Ricinus communis 29682.m000595 N 0.000
30073.m002271 Ricinus communis 30073.m002271 N 0.000
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.000
AT4G17720 Arabidopsis thaliana AT4G17720-TAIR-G N 0.000
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.000
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.000
cassava25244.valid.m1 Manihot esculenta cassava25244.valid.m1 N 0.000
cassava25245.valid.m1 Manihot esculenta cassava25245.valid.m1 N 0.000
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.000
GSVIVG00011624001 Vitis vinifera GSVIVG00011624001 N 0.000
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.000
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.000
MDP0000177505 Malus x domestica MDP0000177505 N 0.000
MDP0000596287 Malus x domestica MDP0000596287 N 0.000
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.000
Medtr8g077770 Medicago truncatula Medtr8g077770 N 0.000
mgf007506m Mimulus guttatus mgf007506m N 0.000
PK05006.1 Cannabis sativa PK05006.1 N 0.000
ppa024222m Prunus persica ppa024222m N 0.000
XM_002865109.1 Arabidopsis lyrata Al_scaffold_0008_128 N 0.000
XM_002867996.1 Arabidopsis lyrata fgenesh2_kg.7__2538__AT4G17720.1 N 0.000