MDP0000596287 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000596287 T57699_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000596287 RRM 6 72

Links

Other RRM family RBPs
Other Malus x domestica RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK05006.1 Cannabis sativa PK05006.1 N 0.896
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.836
MDP0000243576 Malus x domestica MDP0000243576 N 0.836
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.836
30073.m002271 Ricinus communis 30073.m002271 N 0.821
mgf014593m Mimulus guttatus mgf014593m N 0.821
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.821
Medtr8g077770 Medicago truncatula Medtr8g077770 N 0.806
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.791
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.776
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.776
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.768
mgf007506m Mimulus guttatus mgf007506m N 0.761
29682.m000595 Ricinus communis 29682.m000595 N 0.761
PDK_20s1346002g005 Phoenix dactylifera PDK_20s1346002g005 N 0.761
Glyma09g33960.1 Glycine max Glyma09g33960.1 N 0.754
Glyma01g01950.1 Glycine max Glyma01g01950.1 N 0.754
AT4G17720 Arabidopsis thaliana AT4G17720-TAIR-G N 0.735
XM_002867996.1 Arabidopsis lyrata fgenesh2_kg.7__2538__AT4G17720.1 N 0.735
cassava25245.valid.m1 Manihot esculenta cassava25245.valid.m1 N 0.735
GRMZM2G102808 Zea mays GRMZM2G102808 N 0.731
MDP0000177505 Malus x domestica MDP0000177505 N 0.731
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.731
cassava25244.valid.m1 Manihot esculenta cassava25244.valid.m1 N 0.725
LOC_Os03g50560 Oryza sativa LOC_Os03g50560 N 0.725
BGIOSIBCE012743 Oryza indica BGIOSIBCE012743 N 0.725
XM_002865109.1 Arabidopsis lyrata Al_scaffold_0008_128 N 0.716
ppa024222m Prunus persica ppa024222m N 0.716
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.716
AT5G46870 Arabidopsis thaliana AT5G46870-TAIR-G N 0.716
SB10G000940 Sorghum bicolor Sb10g000940 N 0.716
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.716
GRMZM2G051890 Zea mays GRMZM2G051890 N 0.716
GRMZM2G114789 Zea mays GRMZM2G114789 N 0.701