estExt_gwp_gw1.C_590273 (Physcomitrella patens)
CCCH ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00013 (KH_1) 		IPR000571
IPR018111 		estExt_gwp_gw1.C_590273 T00197_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_gw1.C_590273 CCCH ZF 49 73
estExt_gwp_gw1.C_590273 CCCH ZF 118 144
estExt_gwp_gw1.C_590273 KH 187 249
estExt_gwp_gw1.C_590273 CCCH ZF 272 297

Links

Other CCCH ZF,KH family RBPs
Other Physcomitrella patens RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CG3808 Drosophila melanogaster FBgn0036838 N 0.000
GD12311 Drosophila simulans FBgn0184044 N 0.000
GE22791 Drosophila yakuba FBgn0239996 N 0.000
GF10790 Drosophila ananassae FBgn0087830 N 0.000
GG13433 Drosophila erecta FBgn0105705 N 0.000
GH16956 Drosophila grimshawi FBgn0124427 N 0.000
GI11815 Drosophila mojavensis FBgn0134574 N 0.000
GJ13518 Drosophila virilis FBgn0200742 N 0.000
GL21966 Drosophila persimilis FBgn0159559 N 0.000
GM14902 Drosophila sechellia FBgn0169823 N 0.000