gw1.23.236.1 (Trichoderma virens)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 gw1.23.236.1 T05524_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.23.236.1 CCCH ZF 97 122

Links

Other CCCH ZF family RBPs
Other Trichoderma virens RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB07703.1 Alternaria brassicicola AB07703.1 N 0.808
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.808
An14g05330 Aspergillus niger CADANGAG00011470 N 0.731
ANIA_06922 Aspergillus nidulans CADANIAG00007728 N 0.769
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.769
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.731
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.808
BDBG_01641 Blastomyces dermatitidis BDBG_01641 N 0.731
Bm1_13920 Brugia malayi Bm1_13920 N 0.731
CHGG_07887 Chaetomium globosum CHGG_07887 N 0.923
CIMG_09790 Coccidioides immitis CIMG_09790 N 0.808
CPSG_09723 Coccidioides posadasii CPSG_09723 N 0.808
estExt_fgenesh1_pg.C_40101 Trichoderma atroviride estExt_fgenesh1_pg.C_40101 N 1.000
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.962
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.885
estExt_fgenesh1_pm.C_chr_90145 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_90145 N 0.731
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.962
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.885
estExt_Genewise1.C_210247 Trichoderma reesei estExt_Genewise1.C_210247 N 1.000
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.846
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.808
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.808
estExt_Genewise1Plus.C_sca_12_chr5_2_00446 Nectria haematococca estExt_Genewise1Plus.C_sca_12_chr5_2_00446 N 0.923
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.731
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.731
HCAG_08348 Histoplasma capsulatum HCAG_08348 N 0.731
LOAG_00784 Loa loa LOAG_00784 N 0.731
MCYG_02954 Microsporum canis MCYG_02954 N 0.769
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.846
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.769
NCU01795 Neurospora crassa NCU01795 N 0.885
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.808
PABG_07629 Paracoccidioides brasiliensis PABG_07629 N 0.769
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.846
Pc21g03130 Penicillium chrysogenum Pc21g03130 N 0.731
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.846
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.808
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.769
TERG_01412 Trichophyton rubrum TERG_01412 N 0.769
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.769
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.769
UREG_04706 Uncinocarpus reesii UREG_04706 N 0.769
VDAG_08863 Verticillium dahliae VDAG_08863 N 0.808
VDBG_05241 Verticillium albo atrum VDBG_05241 N 0.808
WUBG_13399 Wuchereria bancrofti WUBG_13399 N 0.731
zc3h15 Xenopus tropicalis ENSXETG00000013336 N 0.731
ZC3H15 Anolis carolinensis ENSACAG00000001916 N 0.731