estExt_fgenesh1_pm.C_chr_90145 (Mycosphaerella graminicola)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_fgenesh1_pm.C_chr_90145 T05037_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_chr_90145 CCCH ZF 94 119

Links

Other CCCH ZF family RBPs
Other Mycosphaerella graminicola RBPs

68 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.923
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.923
ANIA_06922 Aspergillus nidulans CADANIAG00007728 N 0.885
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.808
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.808
MCYG_02954 Microsporum canis MCYG_02954 N 0.808
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.808
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.808
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.808
TERG_01412 Trichophyton rubrum TERG_01412 N 0.808
AB07703.1 Alternaria brassicicola AB07703.1 N 0.808
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.808
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.808
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.808
cassava28858.valid.m1 Manihot esculenta cassava28858.valid.m1 N 0.769
e_gw1.19.91.1 Melampsora laricis populina e_gw1.19.91.1 N 0.769
cassava3130.m1 Manihot esculenta cassava3130.m1 N 0.769
Glyma13g19900.1 Glycine max Glyma13g19900.1 N 0.769
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.769
PTTG_08784 Puccinia triticina PTTG_08784 N 0.769
GSVIVG00016357001 Vitis vinifera GSVIVG00016357001 N 0.769
ppa007903m Prunus persica ppa007903m N 0.769
estExt_Genewise1Plus.C_sca_12_chr5_2_00446 Nectria haematococca estExt_Genewise1Plus.C_sca_12_chr5_2_00446 N 0.769
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.769
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.769
An14g05330 Aspergillus niger CADANGAG00011470 N 0.769
cassava28857.valid.m1 Manihot esculenta cassava28857.valid.m1 N 0.769
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.769
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.769
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.769
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.769
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.769
Pc21g03130 Penicillium chrysogenum Pc21g03130 N 0.769
estExt_fgenesh1_pg.C_40101 Trichoderma atroviride estExt_fgenesh1_pg.C_40101 N 0.731
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.731
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.731
NCU01795 Neurospora crassa NCU01795 N 0.731
B9MT73_POPTR Populus trichocarpa POPTR_0308s00200 N 0.731
29805.m001499 Ricinus communis 29805.m001499 N 0.731
Aqu1.222312 Amphimedon queenslandica Aqu1.222312 N 0.731
B9HM02_POPTR Populus trichocarpa POPTR_0008s04540 N 0.731
POPTR_0006s13510 Populus trichocarpa POPTR_0006s13510 N 0.731
XM_002883888.1 Arabidopsis lyrata fgenesh2_kg.3__3143__AT2G20280.1 N 0.731
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.731
ZC3H15 Tetraodon nigroviridis ENSTNIG00000009860 N 0.731
PGTG_08922 Puccinia graminis PGTG_08922 N 0.731
GRMZM2G032258 Zea mays GRMZM2G032258 N 0.731
chr5.LjT08O17.30.nd Lotus japonicus chr5.LjT08O17.30.nd N 0.731
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.731
MDP0000161236 Malus x domestica MDP0000161236 N 0.731
gw1.23.236.1 Trichoderma virens gw1.23.236.1 N 0.731
Glyma19g36150.1 Glycine max Glyma19g36150.1 N 0.731
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.731
estExt_Genewise1.C_210247 Trichoderma reesei estExt_Genewise1.C_210247 N 0.731
Glyma03g33420.1 Glycine max Glyma03g33420.1 N 0.731
Glyma10g05550.1 Glycine max Glyma10g05550.1 N 0.731
PDK_20s1366191g001 Phoenix dactylifera PDK_20s1366191g001 N 0.731
ppa007639m Prunus persica ppa007639m N 0.731
UREG_04706 Uncinocarpus reesii UREG_04706 N 0.731
PK12342.1 Cannabis sativa PK12342.1 N 0.731
AT2G20280 Arabidopsis thaliana AT2G20280-TAIR-G N 0.731
BRADI2G54220 Brachypodium distachyon BRADI2G54220 N 0.731
PGUG_02031 Candida guilliermondii PGUG_02031 N 0.731
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.731
CIMG_09790 Coccidioides immitis CIMG_09790 N 0.731
CPSG_09723 Coccidioides posadasii CPSG_09723 N 0.731
PABG_07629 Paracoccidioides brasiliensis PABG_07629 N 0.731
ACLA_016930 Aspergillus clavatus CADACLAG00000891 N 0.731