MDP0000320891 (Malus x domestica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 MDP0000320891 T06369_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000320891 CCCH ZF 427 449

Links

Other CCCH ZF family RBPs
Other Malus x domestica RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT2G41900 Arabidopsis thaliana AT2G41900-TAIR-G N 1.000
B9GF07_POPTR Populus trichocarpa POPTR_0001s26560 N 0.000
B9HNW7_POPTR Populus trichocarpa POPTR_0009s05810 N 0.739
B9HSM9_POPTR Populus trichocarpa POPTR_0010s19520 N 0.783
B9I454_POPTR Populus trichocarpa POPTR_0012s12760 N 0.783
BRADI1G11760 Brachypodium distachyon BRADI1G11760 N 0.957
cassava36564.valid.m1 Manihot esculenta cassava36564.valid.m1 N 1.000
Cucsa.139290 Cucumis sativus Cucsa.139290 N 0.783
Glyma02g46610.1 Glycine max Glyma02g46610.1 N 0.783
Glyma14g01990.1 Glycine max Glyma14g01990.1 N 0.783
MDP0000196475 Malus x domestica MDP0000196475 N 0.783
MDP0000673185 Malus x domestica MDP0000673185 N 1.000
MDP0000699611 Malus x domestica MDP0000699611 N 0.783
MDP0000911962 Malus x domestica MDP0000911962 N 0.826
Medtr3g028690 Medicago truncatula Medtr3g028690 N 0.957
mgf012825m Mimulus guttatus mgf012825m N 1.000
PK25575.1 Cannabis sativa PK25575.1 N 0.957
POPTR_0008s06940 Populus trichocarpa POPTR_0008s06940 N 0.783
ppa025636m Prunus persica ppa025636m N 0.739