PHUM370670 (Pediculus humanus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		PHUM370670 T07408_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.730
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM370670-PA RRM 14 84
PHUM370670-PA CCHC ZF 107 124

Links

Other CCHC ZF,RRM family RBPs
Other Pediculus humanus RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH75189 Xenopus laevis AAH75189 I 0.719
Ame_R009995 Ailuropoda melanoleuca Ame_R009995 I 0.730
DGIL_AUG5s13030g1t1 Acyrtosiphon pisum DGIL_AUG5s13030g1t1 N 0.719
ENSMODG00000008893 Monodelphis domestica ENSMODG00000008893 I 0.742
ENSOCUG00000026539 Oryctolagus cuniculus ENSOCUG00000026539 I 0.719
ENSPPYG00000004422 Pongo pygmaeus ENSPPYG00000004422 I 0.730
estExt_fgenesh2_pg.C_670012 Branchiostoma floridae estExt_fgenesh2_pg.C_670012 I 0.730
estExt_GenewiseH_1.C_3120062 Branchiostoma floridae estExt_GenewiseH_1.C_3120062 I 0.730
fgenesh1_pg.C_scaffold_178000001 Capitella teleta fgenesh1_pg.C_scaffold_178000001 I 0.730
LOC100049989 Equus caballus ENSECAG00000012174 I 0.719
LOC100410115 Callithrix jacchus ENSCJAG00000017749 I 0.730
Q6DJI9 Xenopus laevis Q6DJI9 I 0.719
XM_001371517.1 Monodelphis domestica ENSMODG00000006493 I 0.742
ZCRB1 Takifugu rubripes ENSTRUG00000016764 I 0.708
ZCRB1 Tursiops truncatus ENSTTRG00000001378 I 0.719
ZCRB1 Vicugna pacos ENSVPAG00000012040 I 0.742
zcrb1 Xenopus tropicalis ENSXETG00000006796 I 0.708
ZCRB1 Homo sapiens ENSG00000139168 D 0.730
ZCRB1 Cavia porcellus ENSCPOG00000014554 I 0.730
ZCRB1 Canis familiaris ENSCAFG00000009788 I 0.719
ZCRB1 Anolis carolinensis ENSACAG00000003172 I 0.753
ZCRB1 Tetraodon nigroviridis ENSTNIG00000018504 I 0.719
ZCRB1 Taeniopygia guttata ENSTGUG00000005829 I 0.742
Zcrb1 Rattus norvegicus ENSRNOG00000004996 I 0.719
ZCRB1 Meleagris gallopavo ENSMGAG00000009450 I 0.742
Zcrb1 Mus musculus ENSMUSG00000022635 I 0.719
ZCRB1 Ornithorhynchus anatinus ENSOANG00000009891 I 0.742
ZCRB1 Loxodonta africana ENSLAFG00000008847 I 0.742
ZCRB1 Gorilla gorilla ENSGGOG00000015647 I 0.730
ZCRB1 Procavia capensis ENSPCAG00000011749 I 0.719
ZCRB1 Gallus gallus ENSGALG00000009544 I 0.742
ZCRB1 Pan troglodytes ENSPTRG00000004838 I 0.730
ZCRB1 Oryzias latipes ENSORLG00000013088 I 0.708
ZCRB1_BOVIN Bos taurus ENSBTAG00000019119 I 0.719