ZCRB1 (Cavia porcellus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSCPOG00000014554 T07219_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000013114 RRM 12 82
ENSCPOP00000013114 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Cavia porcellus RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000004422 Pongo pygmaeus ENSPPYG00000004422 I 1.000
Ame_R009995 Ailuropoda melanoleuca Ame_R009995 I 1.000
LOC100410115 Callithrix jacchus ENSCJAG00000017749 I 1.000
ZCRB1 Gorilla gorilla ENSGGOG00000015647 I 1.000
ZCRB1 Pan troglodytes ENSPTRG00000004838 I 1.000
ZCRB1 Homo sapiens ENSG00000139168 D 1.000
ZCRB1 Tursiops truncatus ENSTTRG00000001378 I 0.989
ENSOCUG00000026539 Oryctolagus cuniculus ENSOCUG00000026539 I 0.989
ZCRB1 Vicugna pacos ENSVPAG00000012040 I 0.989
ZCRB1 Canis familiaris ENSCAFG00000009788 I 0.989
LOC100049989 Equus caballus ENSECAG00000012174 I 0.989
Zcrb1 Mus musculus ENSMUSG00000022635 I 0.989
ZCRB1_BOVIN Bos taurus ENSBTAG00000019119 I 0.989
Zcrb1 Rattus norvegicus ENSRNOG00000004996 I 0.989
ZCRB1 Loxodonta africana ENSLAFG00000008847 I 0.978
ZCRB1 Anolis carolinensis ENSACAG00000003172 I 0.955
ENSMODG00000008893 Monodelphis domestica ENSMODG00000008893 I 0.944
ZCRB1 Procavia capensis ENSPCAG00000011749 I 0.944
ZCRB1 Taeniopygia guttata ENSTGUG00000005829 I 0.944
ZCRB1 Meleagris gallopavo ENSMGAG00000009450 I 0.944
ZCRB1 Gallus gallus ENSGALG00000009544 I 0.944
XM_001371517.1 Monodelphis domestica ENSMODG00000006493 I 0.944
ZCRB1 Ornithorhynchus anatinus ENSOANG00000009891 I 0.933
ZCRB1 Spermophilus tridecemlineatus ENSSTOG00000007241 I 0.888
ZCRB1 Microcebus murinus ENSMICG00000017422 I 0.888
ZCRB1 Pteropus vampyrus ENSPVAG00000006651 I 0.888
ZCRB1 Myotis lucifugus ENSMLUG00000001332 I 0.876
ZCRB1 Erinaceus europaeus ENSEEUG00000000397 I 0.865
AAH75189 Xenopus laevis AAH75189 I 0.854
Q6DJI9 Xenopus laevis Q6DJI9 I 0.854
ZCRB1 Oryzias latipes ENSORLG00000013088 I 0.843
zcrb1 Xenopus tropicalis ENSXETG00000006796 I 0.843
ZCRB1 Echinops telfairi ENSETEG00000019302 I 0.820
ZCRB1 Takifugu rubripes ENSTRUG00000016764 I 0.820
ZCRB1 Tetraodon nigroviridis ENSTNIG00000018504 I 0.820
ZCRB1 Otolemur garnettii ENSOGAG00000013178 I 0.798
ZCRB1 Ochotona princeps ENSOPRG00000011095 I 0.798
ZCRB1 Gasterosteus aculeatus ENSGACG00000018860 I 0.798
zcrb1 Danio rerio ENSDARG00000045691 I 0.775
e_gw1.93.90.1 Lottia gigantea e_gw1.93.90.1 I 0.742
fgenesh1_pg.C_scaffold_178000001 Capitella teleta fgenesh1_pg.C_scaffold_178000001 I 0.742
estExt_GenewiseH_1.C_3120062 Branchiostoma floridae estExt_GenewiseH_1.C_3120062 I 0.730
PHUM370670 Pediculus humanus PHUM370670 I 0.730
estExt_fgenesh2_pg.C_670012 Branchiostoma floridae estExt_fgenesh2_pg.C_670012 I 0.730
estExt_gwp.C_1220057 Nematostella vectensis estExt_gwp.C_1220057 I 0.708