ZCRB1 (Loxodonta africana)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSLAFG00000008847 T07263_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.978
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000007398 RRM 12 82
ENSLAFP00000007428 RRM 12 82
ENSLAFP00000007428 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Loxodonta africana RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCRB1 Dasypus novemcinctus ENSDNOG00000010107 N 0.986
ZCRB1 Pan troglodytes ENSPTRG00000004838 I 0.978
ZCRB1 Cavia porcellus ENSCPOG00000014554 I 0.978
LOC100410115 Callithrix jacchus ENSCJAG00000017749 I 0.978
ZCRB1 Homo sapiens ENSG00000139168 D 0.978
ENSPPYG00000004422 Pongo pygmaeus ENSPPYG00000004422 I 0.978
ZCRB1 Gorilla gorilla ENSGGOG00000015647 I 0.978
Ame_R009995 Ailuropoda melanoleuca Ame_R009995 I 0.978
ZCRB1 Canis familiaris ENSCAFG00000009788 I 0.966
ZCRB1 Tursiops truncatus ENSTTRG00000001378 I 0.966
ZCRB1 Vicugna pacos ENSVPAG00000012040 I 0.966
LOC100049989 Equus caballus ENSECAG00000012174 I 0.966
Zcrb1 Rattus norvegicus ENSRNOG00000004996 I 0.966
Zcrb1 Mus musculus ENSMUSG00000022635 I 0.966
ENSOCUG00000026539 Oryctolagus cuniculus ENSOCUG00000026539 I 0.966
ZCRB1 Procavia capensis ENSPCAG00000011749 I 0.966
ZCRB1_BOVIN Bos taurus ENSBTAG00000019119 I 0.966
ZCRB1 Anolis carolinensis ENSACAG00000003172 I 0.955
ZCRB1 Gallus gallus ENSGALG00000009544 I 0.944
ZCRB1 Meleagris gallopavo ENSMGAG00000009450 I 0.944
ZCRB1 Taeniopygia guttata ENSTGUG00000005829 I 0.944
ENSMODG00000008893 Monodelphis domestica ENSMODG00000008893 I 0.944
XM_001371517.1 Monodelphis domestica ENSMODG00000006493 I 0.944
ZCRB1 Ornithorhynchus anatinus ENSOANG00000009891 I 0.933
Q6DJI9 Xenopus laevis Q6DJI9 I 0.865
ZCRB1 Pteropus vampyrus ENSPVAG00000006651 I 0.865
ZCRB1 Microcebus murinus ENSMICG00000017422 I 0.865
ZCRB1 Oryzias latipes ENSORLG00000013088 I 0.865
AAH75189 Xenopus laevis AAH75189 I 0.865
ZCRB1 Spermophilus tridecemlineatus ENSSTOG00000007241 I 0.865
zcrb1 Xenopus tropicalis ENSXETG00000006796 I 0.854
ZCRB1 Myotis lucifugus ENSMLUG00000001332 I 0.854
ZCRB1 Erinaceus europaeus ENSEEUG00000000397 I 0.843
ZCRB1 Tetraodon nigroviridis ENSTNIG00000018504 I 0.831
ZCRB1 Takifugu rubripes ENSTRUG00000016764 I 0.831
ZCRB1 Echinops telfairi ENSETEG00000019302 I 0.820
ZCRB1 Gasterosteus aculeatus ENSGACG00000018860 I 0.809
ZCRB1 Otolemur garnettii ENSOGAG00000013178 I 0.798
zcrb1 Danio rerio ENSDARG00000045691 I 0.798
ZCRB1 Ochotona princeps ENSOPRG00000011095 I 0.775
e_gw1.93.90.1 Lottia gigantea e_gw1.93.90.1 I 0.753
fgenesh1_pg.C_scaffold_178000001 Capitella teleta fgenesh1_pg.C_scaffold_178000001 I 0.753
estExt_GenewiseH_1.C_3120062 Branchiostoma floridae estExt_GenewiseH_1.C_3120062 I 0.742
estExt_fgenesh2_pg.C_670012 Branchiostoma floridae estExt_fgenesh2_pg.C_670012 I 0.742
PHUM370670 Pediculus humanus PHUM370670 I 0.742
estExt_gwp.C_1220057 Nematostella vectensis estExt_gwp.C_1220057 I 0.708