estExt_Genewise1.C_1590063 (Capitella teleta)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		estExt_Genewise1.C_1590063 T07548_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		0.759
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		0.759
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_1590063 RRM 32 97
estExt_Genewise1.C_1590063 CCHC ZF 152 168

Links

Other CCHC ZF,RRM family RBPs
Other Capitella teleta RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pg.C_90178 Agaricus bisporus estExt_fgenesh2_pg.C_90178 N 0.000
fgenesh3_pg.136__29 Postia placenta fgenesh3_pg.136__29 N 0.000