estExt_Genewise1.C_1590063 (Capitella teleta)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		estExt_Genewise1.C_1590063 T07548_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		0.759
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		0.759
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_1590063 RRM 32 97
estExt_Genewise1.C_1590063 CCHC ZF 152 168

Links

Other CCHC ZF,RRM family RBPs
Other Capitella teleta RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PHUM241330 Pediculus humanus PHUM241330 I 0.771
SRSF7 Tetraodon nigroviridis ENSTNIG00000014279 I 0.762
SRSF7 Takifugu rubripes ENSTRUG00000010529 I 0.762
SRSF7 Oryzias latipes ENSORLG00000000746 I 0.762
SRSF7 Gasterosteus aculeatus ENSGACG00000012311 I 0.762
89490 Helobdella robusta 89490 N 0.762
Srsf7 Mus musculus ENSMUSG00000024097 I 0.759
SRSF7 Ornithorhynchus anatinus ENSOANG00000004405 I 0.759
SRSF7 Oryctolagus cuniculus ENSOCUG00000004087 I 0.759
ENSMODG00000008669 Monodelphis domestica ENSMODG00000008669 I 0.759
SRSF7 Meleagris gallopavo ENSMGAG00000007415 I 0.759
SRSF7 Loxodonta africana ENSLAFG00000005666 I 0.759
SRSF7 Otolemur garnettii ENSOGAG00000010169 I 0.759
SRSF7 Myotis lucifugus ENSMLUG00000015692 I 0.759
SRSF7 Macaca mulatta ENSMMUG00000011025 I 0.759
ENSPPYG00000012480 Pongo pygmaeus ENSPPYG00000012480 I 0.759
SRSF7 Sus scrofa ENSSSCG00000008484 I 0.759
SRSF7 Tupaia belangeri ENSTBEG00000004604 I 0.759
SRSF7 Tarsius syrichta ENSTSYG00000012273 I 0.759
SRSF7 Vicugna pacos ENSVPAG00000003316 I 0.759
Sfrs7 Rattus norvegicus ENSRNOG00000027360 I 0.759
SRSF7 Pteropus vampyrus ENSPVAG00000012076 I 0.759
SRSF7 Procavia capensis ENSPCAG00000011348 I 0.759
SRSF7 Gorilla gorilla ENSGGOG00000014620 I 0.759
SRSF7 Pan troglodytes ENSPTRG00000011851 I 0.759
SRSF7 Ochotona princeps ENSOPRG00000010234 I 0.759
ENSMEUG00000016459 Macropus eugenii ENSMEUG00000016459 I 0.759
ENSCAFG00000006272 Canis familiaris ENSCAFG00000006272 I 0.759
LOC100385878 Callithrix jacchus ENSCJAG00000015185 I 0.759
SFRS7_BOVIN Bos taurus ENSBTAG00000014891 I 0.759
CPIJ013237 Culex quinquefasciatus CPIJ013237 I 0.759
BGIBMGA010396 Bombyx mori BGIBMGA010396 I 0.759
CpipJ_CPIJ013237 Culex pipiens CpipJ_CPIJ013237 I 0.759
SRSF7 Cavia porcellus ENSCPOG00000011785 I 0.759
SRSF7 Anolis carolinensis ENSACAG00000006082 I 0.759
LOC100054033 Equus caballus ENSECAG00000008664 I 0.759
SRSF7 Homo sapiens ENSG00000115875 D 0.759
Srsf7 Dipodomys ordii ENSDORG00000008616 I 0.759
SRSF7 Erinaceus europaeus ENSEEUG00000014487 I 0.759
SRSF7 Dasypus novemcinctus ENSDNOG00000007821 I 0.759
Ame_R012465 Ailuropoda melanoleuca Ame_R012465 I 0.750
ENSDARG00000054296 Danio rerio ENSDARG00000054296 I 0.750
ENSMEUG00000000773 Macropus eugenii ENSMEUG00000000773 I 0.747
ENSMODG00000023693 Monodelphis domestica ENSMODG00000023693 I 0.747
SFRS7 Taeniopygia guttata ENSTGUG00000002080 I 0.747
63593 Helobdella robusta 63593 N 0.747
Q5ZMI0_CHICK Gallus gallus ENSGALG00000013819 I 0.747
B5FZ53_TAEGU Taeniopygia guttata ENSTGUG00000002095 I 0.747
AAH77185 Xenopus laevis AAH77185 I 0.738
AAH77393 Xenopus laevis AAH77393 I 0.738
AAEL017082 Aedes aegypti AAEL017082 I 0.738
SRSF7 Danio rerio ENSDARG00000035325 I 0.738
PHUM284060 Pediculus humanus PHUM284060 I 0.738
srsf7 Xenopus tropicalis ENSXETG00000025300 I 0.738
gw1.10.611.1 Lottia gigantea gw1.10.611.1 I 0.726
ENSRNOG00000025091 Rattus norvegicus ENSRNOG00000025091 I 0.723
DGIL_AUG5s7527g2t1 Acyrtosiphon pisum DGIL_AUG5s7527g2t1 I 0.714
Smp_098890 Schistosoma mansoni Smp_098890 I 0.714
ENSCHOG00000002390 Choloepus hoffmanni ENSCHOG00000002390 I 0.711
Sjc_0048080 Schistosoma japonicum Sjc_0048080 N 0.702
amel4_ncbi_hmm42637 Apis mellifera amel4_ncbi_hmm42637 I 0.702