LOC_Os12g37810 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os12g37810 T12650_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g37810.1 CCHC ZF 211 228

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.000
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.000
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.000
CAOG_03505 Capsaspora owczarzaki CAOG_03505 N 0.000
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.000
EDP44971.1 Malassezia globosa EDP44971.1 N 0.000
estExt_fgenesh1_pg.C_120138 Phytophthora capsici estExt_fgenesh1_pg.C_120138 N 0.000
estExt_Genewise1.C_260003 Chlorella vulgaris estExt_Genewise1.C_260003 N 0.000
estExt_Genewise1.C_260068 Coccomyxa C 169 estExt_Genewise1.C_260068 N 0.000
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.000
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.000
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.000
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.000
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.000
PGTG_01300 Puccinia graminis PGTG_01300 N 0.000
PITG_15784 Phytophthora infestans PITG_15784 N 0.000
PTTG_05043 Puccinia triticina PTTG_05043 N 0.000
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.000
SPRG_02264 Saprolegnia parasitica SPRG_02264 N 0.000
s_459723 Phytophthora sojae s_459723 N 0.000