estExt_fgenesh1_pg.C_120138 (Phytophthora capsici)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_120138 T56206_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_120138 RRM 101 170

Links

Other RRM family RBPs
Other Phytophthora capsici RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gwEuk.4.69.1 Phytophthora ramorum gwEuk.4.69.1 N 1.000
s_459723 Phytophthora sojae s_459723 N 1.000
PITG_15784 Phytophthora infestans PITG_15784 N 0.986
SPRG_02264 Saprolegnia parasitica SPRG_02264 N 0.914
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.743
PTTG_05043 Puccinia triticina PTTG_05043 N 0.729
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.729
PGTG_01300 Puccinia graminis PGTG_01300 N 0.729
EDP44971.1 Malassezia globosa EDP44971.1 N 0.714
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.714
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.700
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.700
estExt_Genewise1.C_260068 Coccomyxa C 169 estExt_Genewise1.C_260068 N 0.700
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.700
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.700
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.700
estExt_Genewise1.C_260003 Chlorella vulgaris estExt_Genewise1.C_260003 N 0.700
CAOG_03505 Capsaspora owczarzaki CAOG_03505 N 0.700
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.700
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.700