CNBG_5499 (Cryptococcus neoformans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CNBG_5499 T28799_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CNBG_5499T0 RRM 86 155

Links

Other RRM family RBPs
Other Cryptococcus neoformans RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.929
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.814
An08g01040 Aspergillus niger CADANGAG00006423 N 0.814
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.800
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.800
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.800
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.800
UM02401 Ustilago maydis UM02401 N 0.800
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.800
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.800
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.800
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.800
EDP44971.1 Malassezia globosa EDP44971.1 N 0.800
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.800
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.800
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.800
MCYG_08495 Microsporum canis MCYG_08495 N 0.786
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.786
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.786
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.786
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.775
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.775
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.771
fgenesh1_pm.C_scaffold_6000038 Sporobolomyces roseus fgenesh1_pm.C_scaffold_6000038 N 0.771
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.771
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.771
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.771
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.771
TERG_02884 Trichophyton rubrum TERG_02884 N 0.771
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.771
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.757
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.757
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.757
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.757
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.757
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.757
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.757
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.757
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.757
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.757
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.757
AB03725.1 Alternaria brassicicola AB03725.1 N 0.743
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.743
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.743
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.743
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.743
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.743
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.743
NCU03946 Neurospora crassa NCU03946 N 0.743
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.743
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.743
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.729
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.729
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.729
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.729
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.729
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.729
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.729
estExt_fgenesh3_pg.C_140127 Postia placenta estExt_fgenesh3_pg.C_140127 N 0.718
e_gwh2.2.847.1 Phanerochaete chrysosporium e_gwh2.2.847.1 I 0.704
estExt_fgenesh1_pm.C_10518 Schizophyllum commune estExt_fgenesh1_pm.C_10518 N 0.704
PITG_15784 Phytophthora infestans PITG_15784 N 0.700
ppa011157m Prunus persica ppa011157m N 0.700
B9IJE1_POPTR Populus trichocarpa POPTR_0017s07850 N 0.700
s_459723 Phytophthora sojae s_459723 N 0.700
gwEuk.4.69.1 Phytophthora ramorum gwEuk.4.69.1 N 0.700
Cucsa.093920 Cucumis sativus Cucsa.093920 N 0.700
Cucsa.093720 Cucumis sativus Cucsa.093720 N 0.700
estExt_fgenesh1_pg.C_120138 Phytophthora capsici estExt_fgenesh1_pg.C_120138 N 0.700
B9GGB8_POPTR Populus trichocarpa POPTR_0001s31900 N 0.700
SJAG_04601 Schizosaccharomyces japonicus SJAG_04601 N 0.700