Glyma14g40510.1 (Glycine max)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Glyma14g40510.1 T14527_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma14g40510.1 CCHC ZF 261 276

Links

Other CCHC ZF family RBPs
Other Glycine max RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30170.m014167 Ricinus communis 30170.m014167 N 0.875
B9GQW8_POPTR Populus trichocarpa POPTR_0002s02570 N 0.875
B9H4V3_POPTR Populus trichocarpa POPTR_0005s25870 N 0.750
B9I8A8_POPTR Populus trichocarpa POPTR_0030s00400 N 0.722
BGIOSIBCE004440 Oryza indica BGIOSIBCE004440 N 0.875
BRADI2G56440 Brachypodium distachyon BRADI2G56440 N 0.750
cassava11141.m1 Manihot esculenta cassava11141.m1 N 0.875
cassava11142.m1 Manihot esculenta cassava11142.m1 N 0.875
cassava11143.m1 Manihot esculenta cassava11143.m1 N 0.875
cassava11144.m1 Manihot esculenta cassava11144.m1 N 0.875
cassava11145.m1 Manihot esculenta cassava11145.m1 N 0.875
cassava11146.m1 Manihot esculenta cassava11146.m1 N 0.875
cassava11147.m1 Manihot esculenta cassava11147.m1 N 0.875
cassava11148.m1 Manihot esculenta cassava11148.m1 N 0.875
cassava11149.m1 Manihot esculenta cassava11149.m1 N 0.875
cassava11150.m1 Manihot esculenta cassava11150.m1 N 0.875
cassava6287.valid.m1 Manihot esculenta cassava6287.valid.m1 N 0.875
cassava6288.valid.m1 Manihot esculenta cassava6288.valid.m1 N 0.875
cassava6289.valid.m1 Manihot esculenta cassava6289.valid.m1 N 0.875
Cucsa.033870 Cucumis sativus Cucsa.033870 N 0.812
Glyma10g30150.1 Glycine max Glyma10g30150.1 N 0.722
Glyma17g37650.1 Glycine max Glyma17g37650.1 N 1.000
Glyma20g37260.1 Glycine max Glyma20g37260.1 N 0.722
GRMZM2G064868 Zea mays GRMZM2G064868 N 0.875
GRMZM2G121404 Zea mays GRMZM2G121404 N 0.875
GSVIVG00009879001 Vitis vinifera GSVIVG00009879001 N 0.812
LOC_Os01g65220 Oryza sativa LOC_Os01g65220 N 0.875
MDP0000206000 Malus x domestica MDP0000206000 N 0.812
MDP0000941174 Malus x domestica MDP0000941174 N 0.812
Medtr4g079110 Medicago truncatula Medtr4g079110 N 0.938
mgf002253m Mimulus guttatus mgf002253m N 0.875
PDK_20s1387941g001 Phoenix dactylifera PDK_20s1387941g001 N 0.778
PK11796.1 Cannabis sativa PK11796.1 N 0.812
POPTR_0005s05060 Populus trichocarpa POPTR_0005s05060 N 0.722
ppa000605m Prunus persica ppa000605m N 0.938
SB03G010040 Sorghum bicolor Sb03g010040 N 0.875
SB07G005160 Sorghum bicolor Sb07g005160 N 0.875
XM_002865463.1 Arabidopsis lyrata scaffold_800897.1 N 0.812
XRN2 Arabidopsis thaliana AT5G42540-TAIR-G N 0.750
XRN3 Arabidopsis thaliana AT1G75660-TAIR-G N 0.750