SNAP_00016463 (Daphnia pulex)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 SNAP_00016463 T14945_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNAP_00016463 CCHC ZF 44 61

Links

Other CCHC ZF family RBPs
Other Daphnia pulex RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava15444.m1 Manihot esculenta cassava15444.m1 N 0.722
cassava20136.m1 Manihot esculenta cassava20136.m1 N 0.722
cassava45865.m1 Manihot esculenta cassava45865.m1 N 0.722
DGIL_AUG5s8628g1t2 Acyrtosiphon pisum DGIL_AUG5s8628g1t2 N 0.722
fgenesh1_pg.C_scaffold_212000013 Daphnia pulex fgenesh1_pg.C_scaffold_212000013 N 0.722
NCBI_GNO_14600006 Daphnia pulex NCBI_GNO_14600006 N 0.833