Skud_Contig2045.4 (Saccharomyces kudriavzevii)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Skud_Contig2045.4 T15139_0.6 SGD (2003-Oct-3)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Skud_Contig2045.4 CCHC ZF 61 78
Skud_Contig2045.4 CCHC ZF 99 116
Skud_Contig2045.4 CCHC ZF 162 179

Links

Other CCHC ZF family RBPs
Other Saccharomyces kudriavzevii RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A0JMV4 Xenopus laevis A0JMV4 I 0.000
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.000
AAH77408 Xenopus laevis AAH77408 I 0.000
AAI26020 Xenopus laevis AAI26020 I 0.000
LOC100052535 Equus caballus ENSECAG00000020447 I 0.000
Q6DDU9 Xenopus laevis Q6DDU9 I 0.000
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.000
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.000
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.000
RBM5 Sorex araneus ENSSARG00000009724 I 0.000
RBM5 Sus scrofa ENSSSCG00000011395 I 0.000
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.000
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.000
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.000
RBM5 Tetraodon nigroviridis ENSTNIG00000014742 I 0.000
RBM5 Takifugu rubripes ENSTRUG00000008292 I 0.000
RBM5 Microcebus murinus ENSMICG00000016179 N 0.000
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.000
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.000
rbm5 Xenopus tropicalis ENSXETG00000007303 I 0.000
RBM5 Tarsius syrichta ENSTSYG00000004158 I 0.000
RBM5 Felis catus ENSFCAG00000014639 N 0.000
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.000
RBM5 Procavia capensis ENSPCAG00000005459 I 0.000
RBM5 Oryzias latipes ENSORLG00000003369 I 0.000
RBM5 Ochotona princeps ENSOPRG00000015154 I 0.000
RBM5 Gasterosteus aculeatus ENSGACG00000000858 I 0.000
RBM5 Homo sapiens ENSG00000003756 D 0.000
RBM5 Echinops telfairi ENSETEG00000012773 I 0.000
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.000
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.000
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.000
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.000
RBM5 Canis familiaris ENSCAFG00000010866 I 0.000
RBM5 Gasterosteus aculeatus ENSGACG00000010469 I 0.000
RBM5 Gallus gallus ENSGALG00000004626 I 0.000
RBM5 Gorilla gorilla ENSGGOG00000014490 I 0.000
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.000
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.000
Rbm5 Mus musculus ENSMUSG00000032580 I 0.000
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.000
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.000
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.000
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.000
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.000
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.000
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.000