CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
AGAP003356
(
Anopheles gambiae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
AGAP003356
T18067_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP003356-PA
KH
99
173
VKVIVPVKEHPKFNFVGKLLGPKGNSLKRLQEETMCKMAILGRGSMKDRKKEEELRLAMDPKYAHLNDDLHVEIN
Links
Other
KH
family RBPs
Other
Anopheles gambiae
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL009694
Aedes aegypti
AAEL009694
N
0.713
AGAP003355
Anopheles gambiae
AGAP003355
N
0.747
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.762
CPIJ014320
Culex quinquefasciatus
CPIJ014320
N
0.773
CPIJ014324
Culex quinquefasciatus
CPIJ014324
N
0.733
CpipJ_CPIJ014320
Culex pipiens
CpipJ_CPIJ014320
N
0.773
CpipJ_CPIJ014324
Culex pipiens
CpipJ_CPIJ014324
N
0.733
fgenesh2_pg.scaffold_166000064
Branchiostoma floridae
fgenesh2_pg.scaffold_166000064
I
0.747
gw.576.16.1
Branchiostoma floridae
gw.576.16.1
I
0.747
nasonia_NCBI_hmm272534
Nasonia vitripennis
nasonia_NCBI_hmm272534
N
0.736