CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
nasonia_NCBI_hmm272534
(
Nasonia vitripennis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
nasonia_NCBI_hmm272534
T18032_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm272534
KH
78
164
SVKVLVPVREHPKFNFVGKLLGPKGNSMKRLQEETMCKMAVLGRGSMKDRQKEEDLRKSLDPKYAHLSDDLHVEITALAPPAEAHAR
Links
Other
KH
family RBPs
Other
Nasonia vitripennis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.931
BGIBMGA014155
Bombyx mori
BGIBMGA014155
N
0.830
GJ19910
Drosophila virilis
FBgn0207052
N
0.795
GH21368
Drosophila grimshawi
FBgn0128830
N
0.795
GK17902
Drosophila willistoni
FBgn0219901
N
0.795
DGIL_AUG5s14032g4t1
Acyrtosiphon pisum
DGIL_AUG5s14032g4t1
N
0.793
AAEL009694
Aedes aegypti
AAEL009694
N
0.784
CpipJ_CPIJ014324
Culex pipiens
CpipJ_CPIJ014324
N
0.782
CPIJ014324
Culex quinquefasciatus
CPIJ014324
N
0.782
GA10291-RA
Drosophila pseudoobscura
FBgn0070349
N
0.773
GE13991
Drosophila yakuba
FBgn0231623
N
0.761
GM15914
Drosophila sechellia
FBgn0170830
N
0.761
GI20563
Drosophila mojavensis
FBgn0143299
N
0.761
GF11894
Drosophila ananassae
FBgn0088934
N
0.761
CG10384
Drosophila melanogaster
FBgn0034731
N
0.761
GG21049
Drosophila erecta
FBgn0113232
N
0.761
GK22901
Drosophila willistoni
FBgn0224863
N
0.759
GE11667
Drosophila yakuba
FBgn0229463
N
0.759
qkr54B
Drosophila melanogaster
FBgn0022987
N
0.759
GA18453-RA
Drosophila pseudoobscura
FBgn0078455
N
0.759
GF13124
Drosophila ananassae
FBgn0090157
N
0.759
GJ20374
Drosophila virilis
FBgn0207514
N
0.759
GL11428
Drosophila persimilis
FBgn0149037
N
0.759
GH21401
Drosophila grimshawi
FBgn0128863
N
0.759
GM21780
Drosophila sechellia
FBgn0176658
N
0.759
GD11271
Drosophila simulans
FBgn0183021
N
0.759
GG20683
Drosophila erecta
FBgn0112870
N
0.759
GI18580
Drosophila mojavensis
FBgn0141319
N
0.759
AGAP003356
Anopheles gambiae
AGAP003356
N
0.736
GD11672
Drosophila simulans
FBgn0183412
N
0.727