FXR1 (Canis familiaris)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCAFG00000011582 T18469_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		1.000
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.783
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000017077 KH 220 279
ENSCAFP00000017077 KH 284 351
ENSCAFP00000017090 KH 220 279
ENSCAFP00000017090 KH 284 351
ENSCAFP00000017098 KH 220 279
ENSCAFP00000017098 KH 284 351

Links

Other KH family RBPs
Other Canis familiaris RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G46120 Arabidopsis thaliana AT1G46120-TAIR-G N 0.000
AT3G46375 Arabidopsis thaliana AT3G46375-TAIR-G N 0.000
AT5G26618 Arabidopsis thaliana AT5G26618-TAIR-G N 0.000
ENSXETG00000001186 Xenopus tropicalis ENSXETG00000001186 N 0.000
ENSXETG00000026345 Xenopus tropicalis ENSXETG00000026345 N 0.000
ENSXETG00000026589 Xenopus tropicalis ENSXETG00000026589 N 0.000
ENSXETG00000027095 Xenopus tropicalis ENSXETG00000027095 N 0.000
ENSXETG00000027303 Xenopus tropicalis ENSXETG00000027303 N 0.000
fgenesh1_pg.C_scaffold_102000036 Daphnia pulex fgenesh1_pg.C_scaffold_102000036 N 0.000
fgenesh1_pg.C_scaffold_37000005 Daphnia pulex fgenesh1_pg.C_scaffold_37000005 N 0.000
fgenesh1_pg.C_scaffold_81000001 Daphnia pulex fgenesh1_pg.C_scaffold_81000001 N 0.000
NCBI_GNO_24800001 Daphnia pulex NCBI_GNO_24800001 N 0.000
SNAP_00029885 Daphnia pulex SNAP_00029885 N 0.000