CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DDX43
(
Loxodonta africana
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSLAFG00000012755
T18931_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000010669
KH
24
84
LCFRLKSDLVGVVIETGRGGSKIRDIQSTTNTKIQIIKGYPEAEVKIFGSTVMQTKAKVVI
Links
Other
KH
family RBPs
Other
Loxodonta africana
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R018778
Ailuropoda melanoleuca
Ame_R018778
N
0.721
DDX43
Vicugna pacos
ENSVPAG00000004969
N
0.721
DDX43
Sus scrofa
ENSSSCG00000004287
N
0.754
DDX43
Pan troglodytes
ENSPTRG00000018344
N
0.705
DDX43
Procavia capensis
ENSPCAG00000005962
N
0.754
DDX43
Bos taurus
ENSBTAG00000021814
N
0.710
Ddx43
Mus musculus
ENSMUSG00000070291
N
0.721
DDX43
Homo sapiens
ENSG00000080007
N
0.705
DDX43
Echinops telfairi
ENSETEG00000001887
N
0.770
DDX43
Erinaceus europaeus
ENSEEUG00000008838
N
0.787
DDX43
Cavia porcellus
ENSCPOG00000003991
N
0.742
ENSOCUG00000006338
Oryctolagus cuniculus
ENSOCUG00000006338
N
0.770