CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Hrb2
(
Rattus norvegicus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSRNOG00000004035
T19425_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000005384
KH
156
205
FVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVV
ENSRNOP00000059249
KH
156
205
FVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVV
Links
Other
KH
family RBPs
Other
Rattus norvegicus
RBPs
144 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
29838.m001638
Ricinus communis
29838.m001638
N
0.000
B9HDY4_POPTR
Populus trichocarpa
POPTR_0006s15080
N
0.000
cassava30352.valid.m1
Manihot esculenta
cassava30352.valid.m1
N
0.000
Cucsa.018350
Cucumis sativus
Cucsa.018350
N
0.000
emb1789
Arabidopsis thaliana
AT5G56930-TAIR-G
N
0.000
Glyma14g39390.1
Glycine max
Glyma14g39390.1
N
0.000
Glyma18g10310.1
Glycine max
Glyma18g10310.1
N
0.000
PK20740.1
Cannabis sativa
PK20740.1
N
0.000
ppa001043m
Prunus persica
ppa001043m
N
0.000
XM_002866127.1
Arabidopsis lyrata
scaffold_802252.1
N
0.000