CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK10610
(
Drosophila willistoni
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0212625
T20008_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0239753
KH
25
85
TIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTSAIFSAFTLI
FBpp0239753
KH
108
171
PIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQI
FBpp0239753
KH
268
333
QHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI
Links
Other
KH
family RBPs
Other
Drosophila willistoni
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AGAP004942
Anopheles gambiae
AGAP004942
N
0.916
amel4_ncbi_hmm16330
Apis mellifera
amel4_ncbi_hmm16330
I
0.822
BGIBMGA012503
Bombyx mori
BGIBMGA012503
N
0.756
DGIL_AUG5s5532g9t1
Acyrtosiphon pisum
DGIL_AUG5s5532g9t1
I
0.828
FBgn0262737
Drosophila melanogaster
FBgn0262737
N
0.995
fgenesh1_pm.C_scaffold_76000004
Capitella teleta
fgenesh1_pm.C_scaffold_76000004
I
0.712
GA20351-RA
Drosophila pseudoobscura
FBgn0080346
N
0.995
GE22592
Drosophila yakuba
FBgn0239809
N
0.995
GG16232
Drosophila erecta
FBgn0108467
N
0.995
GH14429
Drosophila grimshawi
FBgn0121905
N
0.990
GI13561
Drosophila mojavensis
FBgn0136316
N
0.995
GJ11921
Drosophila virilis
FBgn0199174
N
0.995
ISCW016289
Ixodes scapularis
ISCW016289
I
0.712
nasonia_NCBI_hmm938274
Nasonia vitripennis
nasonia_NCBI_hmm938274
I
0.885
PASA_GEN_0700132
Daphnia pulex
PASA_GEN_0700132
I
0.796