DGIL_AUG5s5532g9t1 (Acyrtosiphon pisum)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 DGIL_AUG5s5532g9t1 T18020_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
DGIL_AUG5s5532g9t1 KH 44 104
DGIL_AUG5s5532g9t1 KH 130 193
DGIL_AUG5s5532g9t1 KH 298 364

Links

Other KH family RBPs
Other Acyrtosiphon pisum RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.870
AGAP004942 Anopheles gambiae AGAP004942 N 0.854
GE22592 Drosophila yakuba FBgn0239809 N 0.828
FBgn0262737 Drosophila melanogaster FBgn0262737 N 0.828
GK10610 Drosophila willistoni FBgn0212625 N 0.828
GJ11921 Drosophila virilis FBgn0199174 N 0.828
GH14429 Drosophila grimshawi FBgn0121905 N 0.828
GG16232 Drosophila erecta FBgn0108467 N 0.828
GA20351-RA Drosophila pseudoobscura FBgn0080346 N 0.828
GI13561 Drosophila mojavensis FBgn0136316 N 0.828
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.823
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.818
BGIBMGA012503 Bombyx mori BGIBMGA012503 N 0.758
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.734
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.734
ISCW016289 Ixodes scapularis ISCW016289 I 0.729
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.708
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.705
LOC100050101 Equus caballus ENSECAG00000012413 I 0.705
PCBP3 Homo sapiens ENSG00000183570 I 0.705
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.705
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.705
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.705
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.705
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.705
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.705
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.705
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.705
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.705
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.705