amel4_ncbi_hmm16330 (Apis mellifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 amel4_ncbi_hmm16330 T17983_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.703
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm16330 KH 36 91
amel4_ncbi_hmm16330 KH 117 180
amel4_ncbi_hmm16330 KH 281 346

Links

Other KH family RBPs
Other Apis mellifera RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.932
AGAP004942 Anopheles gambiae AGAP004942 N 0.838
GJ11921 Drosophila virilis FBgn0199174 N 0.827
GI13561 Drosophila mojavensis FBgn0136316 N 0.827
GA20351-RA Drosophila pseudoobscura FBgn0080346 N 0.827
GE22592 Drosophila yakuba FBgn0239809 N 0.827
GG16232 Drosophila erecta FBgn0108467 N 0.827
FBgn0262737 Drosophila melanogaster FBgn0262737 N 0.827
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.823
GH14429 Drosophila grimshawi FBgn0121905 N 0.822
GK10610 Drosophila willistoni FBgn0212625 N 0.822
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.812
ISCW016289 Ixodes scapularis ISCW016289 I 0.774
BGIBMGA012503 Bombyx mori BGIBMGA012503 N 0.746
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.728
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.728
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.717
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.712
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.703
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.703
PCBP3 Homo sapiens ENSG00000183570 I 0.703
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.703
LOC100050101 Equus caballus ENSECAG00000012413 I 0.703
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.703
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.703
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.703
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.703
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.703
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.703
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.703
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.703
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.703
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.703
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.702