fgenesh2_pg.scaffold_166000064 (Branchiostoma floridae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 fgenesh2_pg.scaffold_166000064 T21109_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.728
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_166000064 KH 68 140

Links

Other KH family RBPs
Other Branchiostoma floridae RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9GLB9_POPTR Populus trichocarpa POPTR_0001s03940 N 0.000
BGIOSIBCE016517 Oryza indica BGIOSIBCE016517 N 0.000
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.000
BRADI3G18190 Brachypodium distachyon BRADI3G18190 N 0.000
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.000
GRMZM2G442195 Zea mays GRMZM2G442195 N 0.000
LOC_Os04g51940 Oryza sativa LOC_Os04g51940 N 0.000
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.000
PDK_20s1441394g001 Phoenix dactylifera PDK_20s1441394g001 N 0.000
SB07G006330 Sorghum bicolor Sb07g006330 N 0.000