fgenesh2_pg.scaffold_166000064 (Branchiostoma floridae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 fgenesh2_pg.scaffold_166000064 T21109_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.728
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_166000064 KH 68 140

Links

Other KH family RBPs
Other Branchiostoma floridae RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AGAP003356 Anopheles gambiae AGAP003356 N 0.747
gw.576.16.1 Branchiostoma floridae gw.576.16.1 I 0.986
KHDRBS2 Bos taurus ENSBTAG00000043990 I 0.728
KHDRBS2 Monodelphis domestica ENSMODG00000018714 I 0.728
Khdrbs2 Mus musculus ENSMUSG00000026058 I 0.728
KHDRBS2 Oryctolagus cuniculus ENSOCUG00000012344 I 0.728
KHDRBS2 Pan troglodytes ENSPTRG00000018311 I 0.728
Khdrbs2 Rattus norvegicus ENSRNOG00000012284 I 0.728
KHDRBS2 Sus scrofa ENSSSCG00000001490 I 0.728
KHDRBS2 Taeniopygia guttata ENSTGUG00000012786 I 0.728
KHDRBS2 Tarsius syrichta ENSTSYG00000007203 I 0.728
KHDRBS2 Tursiops truncatus ENSTTRG00000005591 I 0.728
KHDRBS2 Vicugna pacos ENSVPAG00000001469 I 0.716
KHDRBS2 Macaca mulatta ENSMMUG00000003329 I 0.728
KHDRBS2 Anolis carolinensis ENSACAG00000006691 I 0.728
KHDRBS2 Loxodonta africana ENSLAFG00000006655 I 0.728
KHDRBS2 Canis familiaris ENSCAFG00000002470 I 0.728
KHDRBS2 Cavia porcellus ENSCPOG00000025621 I 0.728
KHDRBS2 Dasypus novemcinctus ENSDNOG00000014028 I 0.728
Khdrbs2 Dipodomys ordii ENSDORG00000005701 I 0.716
KHDRBS2 Erinaceus europaeus ENSEEUG00000003986 I 0.728
KHDRBS2 Homo sapiens ENSG00000112232 D 0.728
KHDRBS2 Gallus gallus ENSGALG00000016276 I 0.728
KHDRBS2 Gorilla gorilla ENSGGOG00000025068 I 0.728
KHDRBS2 Meleagris gallopavo ENSMGAG00000013877 I 0.728
khdrbs3 Xenopus tropicalis ENSXETG00000009227 I 0.707
LOC100056966 Equus caballus ENSECAG00000021541 I 0.728
LOC100395662 Callithrix jacchus ENSCJAG00000001766 I 0.728