Khdrbs2 (Dipodomys ordii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDORG00000005701 T18674_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.988
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.845
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		0.765
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		0.765
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000005334 KH 30 109

Links

Other KH family RBPs
Other Dipodomys ordii RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHDRBS2 Pan troglodytes ENSPTRG00000018311 I 0.988
KHDRBS2 Sus scrofa ENSSSCG00000001490 I 0.988
KHDRBS2 Oryctolagus cuniculus ENSOCUG00000012344 I 0.988
KHDRBS2 Macaca mulatta ENSMMUG00000003329 I 0.988
KHDRBS2 Loxodonta africana ENSLAFG00000006655 I 0.988
KHDRBS2 Meleagris gallopavo ENSMGAG00000013877 I 0.988
KHDRBS2 Taeniopygia guttata ENSTGUG00000012786 I 0.988
KHDRBS2 Tarsius syrichta ENSTSYG00000007203 I 0.988
LOC100395662 Callithrix jacchus ENSCJAG00000001766 I 0.988
KHDRBS2 Cavia porcellus ENSCPOG00000025621 I 0.988
KHDRBS2 Canis familiaris ENSCAFG00000002470 I 0.988
KHDRBS2 Bos taurus ENSBTAG00000043990 I 0.988
KHDRBS2 Tursiops truncatus ENSTTRG00000005591 I 0.988
KHDRBS2 Anolis carolinensis ENSACAG00000006691 I 0.988
KHDRBS2 Gorilla gorilla ENSGGOG00000025068 I 0.988
Khdrbs2 Rattus norvegicus ENSRNOG00000012284 I 0.988
LOC100056966 Equus caballus ENSECAG00000021541 I 0.988
KHDRBS2 Gallus gallus ENSGALG00000016276 I 0.988
KHDRBS2 Erinaceus europaeus ENSEEUG00000003986 I 0.988
KHDRBS2 Homo sapiens ENSG00000112232 D 0.988
KHDRBS2 Monodelphis domestica ENSMODG00000018714 I 0.975
Khdrbs2 Mus musculus ENSMUSG00000026058 I 0.975
KHDRBS2 Vicugna pacos ENSVPAG00000001469 I 0.975
KHDRBS2 Dasypus novemcinctus ENSDNOG00000014028 I 0.975
KHDRBS2 Takifugu rubripes ENSTRUG00000015760 I 0.926
khdrbs2 Danio rerio ENSDARG00000069469 I 0.926
KHDRBS2 Gasterosteus aculeatus ENSGACG00000006097 I 0.901
KHDRBS2 Oryzias latipes ENSORLG00000010165 I 0.889
KHDRBS2 Procavia capensis ENSPCAG00000001426 I 0.852
KHDRBS3 Tursiops truncatus ENSTTRG00000001270 I 0.845
LOC100399263 Callithrix jacchus ENSCJAG00000004331 I 0.845
Q6J4Q9_PANTR Pan troglodytes ENSPTRG00000020608 I 0.845
KHDRBS3 Canis familiaris ENSCAFG00000001166 I 0.845
KHDRBS3 Echinops telfairi ENSETEG00000004701 I 0.845
LOC100058116 Equus caballus ENSECAG00000010194 I 0.845
KHDRBS3 Otolemur garnettii ENSOGAG00000005150 I 0.845
KHDRBS3 Sus scrofa ENSSSCG00000005941 I 0.845
A4FV24_BOVIN Bos taurus ENSBTAG00000002181 I 0.845
KHDRBS3 Homo sapiens ENSG00000131773 D 0.845
KHDRBS3 Tupaia belangeri ENSTBEG00000004773 I 0.845
KHDRBS3 Loxodonta africana ENSLAFG00000004849 I 0.845
KHDRBS3 Monodelphis domestica ENSMODG00000000975 I 0.845
Q6J4Q6_MACMU Macaca mulatta ENSMMUG00000022248 I 0.845
KHDRBS3 Anolis carolinensis ENSACAG00000012042 I 0.845
Ame_R010681 Ailuropoda melanoleuca Ame_R010681 I 0.845
Khdrbs3 Mus musculus ENSMUSG00000022332 I 0.845
KHDRBS3 Ornithorhynchus anatinus ENSOANG00000014074 I 0.845
Q6J4Q8_9PRIM Gorilla gorilla ENSGGOG00000000940 I 0.845
KHDRBS3 Cavia porcellus ENSCPOG00000000342 I 0.845
KHDRBS3 Gallus gallus ENSGALG00000016203 I 0.833
KHDRBS3 Meleagris gallopavo ENSMGAG00000012888 I 0.833
KHDRBS3 Oryctolagus cuniculus ENSOCUG00000000743 I 0.833
KHDRBS3 Taeniopygia guttata ENSTGUG00000012611 I 0.833
KHDRBS3 Spermophilus tridecemlineatus ENSSTOG00000008710 I 0.833
KHDRBS3 Ochotona princeps ENSOPRG00000000404 I 0.833
KHDRBS2 Myotis lucifugus ENSMLUG00000005484 I 0.827
KHDRBS3 Pteropus vampyrus ENSPVAG00000017021 I 0.824
khdrbs3 Xenopus tropicalis ENSXETG00000009227 I 0.821
Ame_R015982 Ailuropoda melanoleuca Ame_R015982 I 0.817
KHDRBS3 Takifugu rubripes ENSTRUG00000013451 I 0.798
KHDRBS3 Oryzias latipes ENSORLG00000013441 I 0.798
KHDRBS3 Tetraodon nigroviridis ENSTNIG00000014021 I 0.798
KHDRBS1 Oryzias latipes ENSORLG00000020884 I 0.790
KHDRBS1 Oryzias latipes ENSORLG00000017156 I 0.790
KHDRBS3 Gasterosteus aculeatus ENSGACG00000008847 I 0.786
KHDRBS1 Taeniopygia guttata ENSTGUG00000017346 I 0.786
KHDRBS1 Takifugu rubripes ENSTRUG00000012039 I 0.783
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000017471 I 0.783
khdrbs1a Danio rerio ENSDARG00000052856 I 0.778
KHDRBS1 Takifugu rubripes ENSTRUG00000010001 I 0.778
KHDRBS1 Gasterosteus aculeatus ENSGACG00000009219 I 0.778
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000013071 I 0.778
KHDRBS1 Anolis carolinensis ENSACAG00000011693 I 0.776
ENSDARG00000078082 Danio rerio ENSDARG00000078082 I 0.765
khdrbs1b Danio rerio ENSDARG00000070475 I 0.765
Ame_R010128 Ailuropoda melanoleuca Ame_R010128 I 0.765
ENSCHOG00000006973 Choloepus hoffmanni ENSCHOG00000006973 I 0.765
KHDRBS1 Cavia porcellus ENSCPOG00000024148 I 0.765
KHDRBS1 Equus caballus ENSECAG00000019346 I 0.765
LOC100414412 Callithrix jacchus ENSCJAG00000006580 I 0.765
KHDRBS1 Canis familiaris ENSCAFG00000010777 I 0.765
Q29RQ2_BOVIN Bos taurus ENSBTAG00000012497 I 0.765
KHDRBS1 Felis catus ENSFCAG00000006511 I 0.765
KHDRBS1 Tupaia belangeri ENSTBEG00000016857 I 0.765
KHDRBS1 Ornithorhynchus anatinus ENSOANG00000012357 I 0.765
Khdrbs1 Mus musculus ENSMUSG00000028790 D 0.765
XM_001365874.1 Monodelphis domestica ENSMODG00000017551 I 0.765
KHDRBS1 Spermophilus tridecemlineatus ENSSTOG00000014138 I 0.765
KHDRBS1 Pteropus vampyrus ENSPVAG00000013289 I 0.765
KHDRBS1 Pan troglodytes ENSPTRG00000000469 I 0.765
KHDRBS1 Ochotona princeps ENSOPRG00000005131 I 0.765
KHDRBS1 Procavia capensis ENSPCAG00000009844 I 0.765
ENSPPYG00000001605 Pongo pygmaeus ENSPPYG00000001605 I 0.765
KHDRBS1 Gorilla gorilla ENSGGOG00000008633 I 0.765
KHDRBS1 Macaca mulatta ENSMMUG00000023438 I 0.765
KHDR1_CHICK Gallus gallus ENSGALG00000003272 I 0.765
KHDRBS1 Meleagris gallopavo ENSMGAG00000004455 I 0.765
KHDRBS1 Loxodonta africana ENSLAFG00000009414 I 0.765
KHDRBS1 Oryctolagus cuniculus ENSOCUG00000007654 I 0.765
KHDRBS1 Vicugna pacos ENSVPAG00000006966 I 0.765
KHDRBS1 Tarsius syrichta ENSTSYG00000004921 I 0.765
KHDRBS1 Homo sapiens ENSG00000121774 D 0.765
KHDRBS1 Tursiops truncatus ENSTTRG00000009637 I 0.765
khdrbs2 Xenopus tropicalis ENSXETG00000004451 I 0.753
KHDRBS1 Sorex araneus ENSSARG00000008479 I 0.750
Khdrbs3 Rattus norvegicus ENSRNOG00000009539 I 0.738
KHDRBS3 Sorex araneus ENSSARG00000011751 I 0.738
khdrbs1 Xenopus tropicalis ENSXETG00000005246 I 0.729
gw.576.16.1 Branchiostoma floridae gw.576.16.1 I 0.728
e_gw.41.46.1 Nematostella vectensis e_gw.41.46.1 I 0.721
fgenesh2_pg.scaffold_166000064 Branchiostoma floridae fgenesh2_pg.scaffold_166000064 I 0.716
KHDRBS3 Tarsius syrichta ENSTSYG00000004106 I 0.702