CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Minc08810
(
Meloidogyne incognita
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Minc08810
T21884_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc08810
KH
180
229
LSRAIGRIAGKDGRVKTTIESVTQTRIVLADDKIHLLGAFNNLKIARHTI
Links
Other
KH
family RBPs
Other
Meloidogyne incognita
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH42279
Xenopus laevis
AAH42279
N
0.700
AAQ24169
Xenopus laevis
AAQ24169
N
0.700
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.700
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.700
Bm1_42995
Brugia malayi
Bm1_42995
N
0.740
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.700
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.700
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.700
estExt_Genewise1.C_5820041
Capitella teleta
estExt_Genewise1.C_5820041
N
0.720
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.700
fgenesh1_pg.scaffold_18000119
Nematostella vectensis
fgenesh1_pg.scaffold_18000119
N
0.700
fgenesh2_pg.scaffold_196000015
Branchiostoma floridae
fgenesh2_pg.scaffold_196000015
N
0.740
fgenesh2_pm.scaffold_78000001
Branchiostoma floridae
fgenesh2_pm.scaffold_78000001
N
0.740
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.700
LOAG_05624
Loa loa
LOAG_05624
N
0.740
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.700
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.700
Minc09852
Meloidogyne incognita
Minc09852
N
1.000
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.700
PHUM356890
Pediculus humanus
PHUM356890
N
0.700
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.700
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.700
pno1
Danio rerio
ENSDARG00000008502
N
0.720
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.700
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.700
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.700
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.700
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.720
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.700
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.700
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.700
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.700
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.700
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.700
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.700
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.700
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.720
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.700
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.700
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.720
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.700
PNO1
Homo sapiens
ENSG00000115946
N
0.700
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.700
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.700
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.700
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.700
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.700
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.700
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.720
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.720
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.700
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.700
WUBG_12774
Wuchereria bancrofti
WUBG_12774
N
0.740
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.700
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.740
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.740
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.720
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.740
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.740