CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AFUA_5G04340
(
Aspergillus fumigatus
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
CADAFUAG00002839
T24081_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00002839
PUF
451
478
QAYPLMVNRFGNFLVQRCFEHGTTEQVV
CADAFUAP00002839
PUF
483
515
AIKGNTLSLSMDPFGCHVVQKAFDSVPEEHKAV
CADAFUAP00002839
PUF
524
544
IPETVIHRYACHVWQKLFELR
CADAFUAP00002839
PUF
560
591
LQGMWHEVALGETGSLVVQNIFENCVEDEKRP
CADAFUAP00002839
PUF
595
629
EVIAKIDVLAHGQFGNWCIQHICEHGAPQDKTRAI
CADAFUAP00002839
PUF
636
665
SVDYSMDQFASKIVEKCLKIGGSEFLDRYL
CADAFUAP00002839
PUF
680
708
LIDIAGDQYGNYLIQWILMNAAPHQRELV
Links
Other
PUF
family RBPs
Other
Aspergillus fumigatus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFLA_007170
Aspergillus flavus
CADAFLAG00010780
N
0.929
AO090102000642
Aspergillus oryzae
CADAORAG00009924
N
0.929
ATEG_07977
Aspergillus terreus
CADATEAG00005031
N
0.713
BC1G_02637
Botrytis cinerea
BC1G_02637
N
0.735
CHGG_10227
Chaetomium globosum
CHGG_10227
N
0.750
CIMG_06323
Coccidioides immitis
CIMG_06323
N
0.876
CPSG_00751
Coccidioides posadasii
CPSG_00751
N
0.876
EAT91264.2
Phaeosphaeria nodorum
EAT91264.2
N
0.762
estExt_fgenesh1_pm.C_130085
Neurospora tetrasperma
estExt_fgenesh1_pm.C_130085
N
0.754
e_gw1.2.144.1
Mycosphaerella graminicola
e_gw1.2.144.1
N
0.760
fgenesh1_pm.7_#_317
Myceliophthora thermophila
fgenesh1_pm.7_#_317
N
0.754
fgenesh2_pm.6_#_443
Thielavia terrestris
fgenesh2_pm.6_#_443
N
0.778
FOXG_07983
Fusarium oxysporum
FOXG_07983
N
0.743
FVEG_04902
Fusarium verticillioides
FVEG_04902
N
0.743
GLRG_05168
Colletotrichum graminicola
GLRG_05168
N
0.719
GSTUMT00009368001
Tuber melanosporum
GSTUMT00009368001
N
0.747
gw1.14.69.1
Mycosphaerella fijiensis
gw1.14.69.1
N
0.770
MCYG_01907
Microsporum canis
MCYG_01907
N
0.840
MGYG_04164
Microsporum gypseum
MGYG_04164
N
0.845
NCU01760
Neurospora crassa
NCU01760
N
0.754
NFIA_037730
Neosartorya fischeri
CADNFIAG00003211
N
0.967
Pa_3_5000
Podospora anserina
Pa_3_5000
N
0.763
PMAA_095580
Penicillium marneffei
PMAA_095580
N
0.875
SNOG_01615
Stagonospora nodorum
SNOG_01615
N
0.762
SS1G_01761
Sclerotinia sclerotiorum
SS1G_01761
N
0.735
TEQG_03139
Trichophyton equinum
TEQG_03139
N
0.832
TERG_04493
Trichophyton rubrum
TERG_04493
N
0.841
TESG_00492
Trichophyton tonsurans
TESG_00492
N
0.836
UREG_04073
Uncinocarpus reesii
UREG_04073
N
0.880
VDAG_08882
Verticillium dahliae
VDAG_08882
N
0.731
VDBG_05223
Verticillium albo atrum
VDBG_05223
N
0.731