CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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gw1.14.69.1
(
Mycosphaerella fijiensis
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
gw1.14.69.1
T24903_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.14.69.1
PUF
94
125
AIIDQAYPLMVNRFGNFLVQRCFEHGTPEQVV
gw1.14.69.1
PUF
130
163
AIRGNTLNLSMDAFGCHVVQKAFDCVPEEYKAIM
gw1.14.69.1
PUF
170
192
RIPETVIHRYACHVWQKLFELRW
gw1.14.69.1
PUF
207
240
LRGMWHEVALGETGSLVVQNIFENCLEEDKRPCI
gw1.14.69.1
PUF
243
276
VLSSIDVVAHGQFGNWCIQHICEHGSIPDRTRAI
gw1.14.69.1
PUF
280
312
IRFASEYSMDQFASKVVEKCLKIGGSDFLDRYL
gw1.14.69.1
PUF
327
355
LIDISGDQFGNYLIQYILTHGDPERREIV
Links
Other
PUF
family RBPs
Other
Mycosphaerella fijiensis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GA21622-RA
Drosophila pseudoobscura
FBgn0081607
I
0.000
GE13838
Drosophila yakuba
FBgn0231486
I
0.000
GH22768
Drosophila grimshawi
FBgn0130225
I
0.000
GJ21415
Drosophila virilis
FBgn0208541
I
0.000
GK15699
Drosophila willistoni
FBgn0217702
I
0.000
sm
Drosophila melanogaster
FBgn0003435
D
0.000