RBM5 (Oryctolagus cuniculus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSOCUG00000011652 T25617_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.965
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.965
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000010022 RRM 100 172
ENSOCUP00000010022 RanBP ZF 181 210
ENSOCUP00000010022 RRM 233 302
ENSOCUP00000015826 RanBP ZF 21 50
ENSOCUP00000015826 RRM 108 177

Links

Other RanBP ZF,RRM family RBPs
Other Oryctolagus cuniculus RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A0JMV4 Xenopus laevis A0JMV4 I 0.825
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.990
AAH77408 Xenopus laevis AAH77408 I 0.825
AAI26020 Xenopus laevis AAI26020 I 0.825
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.965
LOC100052535 Equus caballus ENSECAG00000020447 I 0.965
Q6DDU9 Xenopus laevis Q6DDU9 I 0.825
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.916
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.965
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.917
RBM5 Microcebus murinus ENSMICG00000016179 N 0.958
RBM5 Sus scrofa ENSSSCG00000011395 I 0.965
RBM5 Sorex araneus ENSSARG00000009724 I 0.763
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.965
RBM5 Tetraodon nigroviridis ENSTNIG00000014742 I 0.709
RBM5 Takifugu rubripes ENSTRUG00000008292 I 0.728
RBM5 Tarsius syrichta ENSTSYG00000004158 I 0.728
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.931
rbm5 Xenopus tropicalis ENSXETG00000007303 I 0.804
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.965
RBM5 Felis catus ENSFCAG00000014639 N 0.888
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.888
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.960
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.965
RBM5 Procavia capensis ENSPCAG00000005459 I 0.769
RBM5 Gallus gallus ENSGALG00000004626 I 0.910
RBM5 Homo sapiens ENSG00000003756 D 0.965
RBM5 Echinops telfairi ENSETEG00000012773 I 0.931
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.965
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.965
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.965
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.890
RBM5 Canis familiaris ENSCAFG00000010866 I 0.965
RBM5 Gorilla gorilla ENSGGOG00000014490 I 0.867
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.965
RBM5 Oryzias latipes ENSORLG00000003369 I 0.728
RBM5 Ochotona princeps ENSOPRG00000015154 I 0.780
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.960
Rbm5 Mus musculus ENSMUSG00000032580 I 0.965
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.960
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.965
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.960
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.917
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.864
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.965