DGIL_AUG5s4302g1t1 (Acyrtosiphon pisum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 DGIL_AUG5s4302g1t1 T32059_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
U2af50
M078_0.6 		Drosophila melanogaster UUUUUYY RNAcompete
Ray et al.(2013)
RNCMPT00080 		0.870
U2AF2
M077_0.6 		Homo sapiens UUUUUYC RNAcompete
Ray et al.(2013)
RNCMPT00079 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
DGIL_AUG5s4302g1t1 RRM 125 199
DGIL_AUG5s4302g1t1 RRM 235 305
DGIL_AUG5s4302g1t1 RRM 364 425

Links

Other RRM family RBPs
Other Acyrtosiphon pisum RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010535 Aedes aegypti AAEL010535 N 0.000
AGAP008634 Anopheles gambiae AGAP008634 N 0.000
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.000
CG8635 Drosophila melanogaster FBgn0033317 N 0.000
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.000
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.000
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.000
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.000
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.000
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.000
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.000
fgenesh2_pg.scaffold_616000019 Branchiostoma floridae fgenesh2_pg.scaffold_616000019 N 0.000
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.000
GE22859 Drosophila yakuba FBgn0240063 N 0.000
GF12572 Drosophila ananassae FBgn0089609 N 0.000
GG10627 Drosophila erecta FBgn0102935 N 0.000
GI20775 Drosophila mojavensis FBgn0143510 N 0.000
GJ20510 Drosophila virilis FBgn0207650 N 0.000
GL11672 Drosophila persimilis FBgn0149281 N 0.000
GM20672 Drosophila sechellia FBgn0175554 N 0.000
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.000
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.000
Smp_099900 Schistosoma mansoni Smp_099900 N 0.000
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.000
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.000
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.000