CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSBTAG00000012763
(
Bos taurus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSBTAG00000012763
T34852_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000016960
RRM
16
60
LFIRGLSFETIDESLSSHFEMGKAHRLVVMRVPNTKHSRGFGFVT
ENSBTAP00000016960
RRM
105
173
IFVGGIQEGTEEHHLRNNFEQYGKIDIEIMTDRGSDKKRGFAFETFDDHDSVDKIVIQKYHTVNGHNCE
Links
Other
RRM
family RBPs
Other
Bos taurus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Genemark.11049_g
Serpula lacrymans
Genemark.11049_g
N
0.000
Genemark.11600_g
Serpula lacrymans
Genemark.11600_g
N
0.000
Genemark.12016_g
Serpula lacrymans
Genemark.12016_g
N
0.000
Genemark.12122_g
Serpula lacrymans
Genemark.12122_g
N
0.000
Genemark.1877_g
Serpula lacrymans
Genemark.1877_g
N
0.000
Genemark.2652_g
Serpula lacrymans
Genemark.2652_g
N
0.000
Genemark.446_g
Serpula lacrymans
Genemark.446_g
N
0.000
Genemark.4749_g
Serpula lacrymans
Genemark.4749_g
N
0.000
Genemark.4999_g
Serpula lacrymans
Genemark.4999_g
N
0.000
Genemark.5111_g
Serpula lacrymans
Genemark.5111_g
N
0.000
Genemark.618_g
Serpula lacrymans
Genemark.618_g
N
0.000
Genemark.8022_g
Serpula lacrymans
Genemark.8022_g
N
0.000
Genemark.8882_g
Serpula lacrymans
Genemark.8882_g
N
0.000
Genemark.9714_g
Serpula lacrymans
Genemark.9714_g
N
0.000
Genemark.983_g
Serpula lacrymans
Genemark.983_g
N
0.000