ENSCING00000003762 (Ciona intestinalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCING00000003762 T35382_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000007774 RRM 9 78
ENSCINP00000007774 RRM 97 165
ENSCINP00000007774 RRM 439 509
ENSCINP00000007778 RRM 22 91
ENSCINP00000007778 RRM 110 178
ENSCINP00000007778 RRM 415 485
ENSCINP00000007779 RRM 16 85
ENSCINP00000007779 RRM 104 172
ENSCINP00000007779 RRM 393 463

Links

Other RRM family RBPs
Other Ciona intestinalis RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAB09041 Xenopus laevis AAB09041 N 0.704
AAH45035 Xenopus laevis AAH45035 N 0.704
Ame_R017712 Ailuropoda melanoleuca Ame_R017712 N 0.709
CELF2 Anolis carolinensis ENSACAG00000007661 N 0.709
CELF2 Macaca mulatta ENSMMUG00000011468 N 0.709
Celf2 Mus musculus ENSMUSG00000002107 N 0.709
CELF2 Oryctolagus cuniculus ENSOCUG00000004961 N 0.709
CELF2 Ochotona princeps ENSOPRG00000011502 N 0.709
CELF2 Pan troglodytes ENSPTRG00000002284 N 0.709
CELF2 Tupaia belangeri ENSTBEG00000007939 N 0.709
CELF2 Tetraodon nigroviridis ENSTNIG00000007201 N 0.704
CELF2 Takifugu rubripes ENSTRUG00000010147 N 0.704
celf2 Xenopus tropicalis ENSXETG00000021992 N 0.704
CELF2 Microcebus murinus ENSMICG00000007867 N 0.709
CELF2 Loxodonta africana ENSLAFG00000013612 N 0.709
CELF2 Canis familiaris ENSCAFG00000004973 N 0.709
CELF2 Cavia porcellus ENSCPOG00000012567 N 0.709
celf2 Danio rerio ENSDARG00000002131 N 0.704
CELF2 Equus caballus ENSECAG00000006649 N 0.709
CELF2 Erinaceus europaeus ENSEEUG00000005658 N 0.709
CELF2 Homo sapiens ENSG00000048740 N 0.709
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.709
CELF2_CHICK Gallus gallus ENSGALG00000006713 N 0.709
Cugbp2 Rattus norvegicus ENSRNOG00000023661 N 0.709
CUGBP2-1 Taeniopygia guttata ENSTGUG00000002136 N 0.709
ENSCSAVG00000007662 Ciona savignyi ENSCSAVG00000007662 N 0.864
ENSPPYG00000002083 Pongo pygmaeus ENSPPYG00000002083 N 0.709
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.709
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.709
Q7ZXE2 Xenopus laevis Q7ZXE2 N 0.704