celf2 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000002131 T36030_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000025183 RRM 27 98
ENSDARP00000025183 RRM 119 187
ENSDARP00000025183 RRM 412 482
ENSDARP00000072392 RRM 24 95
ENSDARP00000072392 RRM 116 184
ENSDARP00000072392 RRM 384 454

Links

Other RRM family RBPs
Other Danio rerio RBPs

93 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF2 Takifugu rubripes ENSTRUG00000010147 N 0.991
CELF2 Tetraodon nigroviridis ENSTNIG00000007201 N 0.986
CELF2 Loxodonta africana ENSLAFG00000013612 N 0.972
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.972
CELF2_CHICK Gallus gallus ENSGALG00000006713 N 0.972
CELF2 Oryctolagus cuniculus ENSOCUG00000004961 N 0.972
CELF2 Microcebus murinus ENSMICG00000007867 N 0.972
Celf2 Mus musculus ENSMUSG00000002107 N 0.972
CELF2 Ochotona princeps ENSOPRG00000011502 N 0.972
Ame_R017712 Ailuropoda melanoleuca Ame_R017712 N 0.972
CELF2 Macaca mulatta ENSMMUG00000011468 N 0.972
CELF2 Anolis carolinensis ENSACAG00000007661 N 0.972
CUGBP2-1 Taeniopygia guttata ENSTGUG00000002136 N 0.972
CELF2 Pan troglodytes ENSPTRG00000002284 N 0.972
CELF2 Equus caballus ENSECAG00000006649 N 0.972
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.972
Cugbp2 Rattus norvegicus ENSRNOG00000023661 N 0.972
CELF2 Cavia porcellus ENSCPOG00000012567 N 0.972
ENSPPYG00000002083 Pongo pygmaeus ENSPPYG00000002083 N 0.972
CELF2 Erinaceus europaeus ENSEEUG00000005658 N 0.972
CELF2 Homo sapiens ENSG00000048740 N 0.972
CELF2 Canis familiaris ENSCAFG00000004973 N 0.972
CELF2 Tupaia belangeri ENSTBEG00000007939 N 0.972
celf2 Xenopus tropicalis ENSXETG00000021992 N 0.967
AAH45035 Xenopus laevis AAH45035 N 0.967
Q7ZXE2 Xenopus laevis Q7ZXE2 N 0.967
AAB09041 Xenopus laevis AAB09041 N 0.967
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.948
ACH69783 Xenopus laevis ACH69783 N 0.931
CELF2 Choloepus hoffmanni ENSCHOG00000002945 N 0.916
CUGBP1 Taeniopygia guttata ENSTGUG00000010377 N 0.906
CELF1 Meleagris gallopavo ENSMGAG00000010629 N 0.906
CELF1 Anolis carolinensis ENSACAG00000002114 N 0.906
CELF1_CHICK Gallus gallus ENSGALG00000008097 N 0.906
CELF1 Monodelphis domestica ENSMODG00000019913 N 0.906
CELF1 Macropus eugenii ENSMEUG00000007763 N 0.906
CELF1 Ornithorhynchus anatinus ENSOANG00000007896 N 0.901
LOC100392717 Callithrix jacchus ENSCJAG00000020133 N 0.897
CELF1 Cavia porcellus ENSCPOG00000007871 N 0.897
CELF1 Canis familiaris ENSCAFG00000008452 N 0.897
A7MB95_BOVIN Bos taurus ENSBTAG00000002520 N 0.897
CELF1 Tursiops truncatus ENSTTRG00000014157 N 0.897
Ame_R009875 Ailuropoda melanoleuca Ame_R009875 N 0.897
CELF1 Vicugna pacos ENSVPAG00000000336 N 0.897
Cugbp1 Rattus norvegicus ENSRNOG00000010379 N 0.897
Celf1 Mus musculus ENSMUSG00000005506 N 0.897
CELF1 Loxodonta africana ENSLAFG00000003484 N 0.897
CELF1 Homo sapiens ENSG00000149187 N 0.897
CELF1 Equus caballus ENSECAG00000007741 N 0.897
CELF1 Oryctolagus cuniculus ENSOCUG00000001311 N 0.897
CELF1 Macaca mulatta ENSMMUG00000011657 N 0.897
CELF2 Gasterosteus aculeatus ENSGACG00000004426 N 0.893
CELF1 Ochotona princeps ENSOPRG00000003239 N 0.892
CELF2 Oryzias latipes ENSORLG00000003894 N 0.888
CELF2 Tetraodon nigroviridis ENSTNIG00000016009 N 0.888
ENSPPYG00000003302 Pongo pygmaeus ENSPPYG00000003302 N 0.887
AAC41243 Xenopus laevis AAC41243 N 0.887
CELF1 Takifugu rubripes ENSTRUG00000001711 N 0.887
celf1 Xenopus tropicalis ENSXETG00000009044 N 0.887
AAI08575 Xenopus laevis AAI08575 N 0.887
O57406 Xenopus laevis O57406 N 0.887
CELF2 Takifugu rubripes ENSTRUG00000016905 N 0.883
Celf1 Dipodomys ordii ENSDORG00000013721 N 0.883
celf1 Danio rerio ENSDARG00000005315 N 0.878
AAH57743 Xenopus laevis AAH57743 N 0.873
Q6PF35 Xenopus laevis Q6PF35 N 0.873
AAH70706 Xenopus laevis AAH70706 N 0.873
CELF1 Procavia capensis ENSPCAG00000002631 N 0.864
CELF1 Microcebus murinus ENSMICG00000007157 N 0.854
CELF2 Procavia capensis ENSPCAG00000010882 N 0.835
CELF2 Macropus eugenii ENSMEUG00000015276 N 0.830
CELF2 Tursiops truncatus ENSTTRG00000014665 N 0.816
CELF1 Gasterosteus aculeatus ENSGACG00000014226 N 0.798
CELF2 Oryzias latipes ENSORLG00000017111 N 0.793
CELF2 Monodelphis domestica ENSMODG00000016763 N 0.784
e_gw.91.28.1 Branchiostoma floridae e_gw.91.28.1 I 0.784
CELF2 Vicugna pacos ENSVPAG00000009360 N 0.783
CELF2 Tarsius syrichta ENSTSYG00000005118 N 0.783
Celf2 Dipodomys ordii ENSDORG00000006455 N 0.779
CELF1 Tupaia belangeri ENSTBEG00000005140 N 0.774
CELF1 Erinaceus europaeus ENSEEUG00000009782 N 0.770
CELF1 Pan troglodytes ENSPTRG00000003568 N 0.770
CELF1 Sorex araneus ENSSARG00000003207 N 0.770
CELF1 Dasypus novemcinctus ENSDNOG00000009523 N 0.764
CELF1 Choloepus hoffmanni ENSCHOG00000004196 N 0.761
CELF2 Echinops telfairi ENSETEG00000008414 N 0.757
CELF1 Myotis lucifugus ENSMLUG00000016631 N 0.746
CELF1 Tarsius syrichta ENSTSYG00000003866 N 0.736
CELF1 Pteropus vampyrus ENSPVAG00000007340 N 0.736
CELF1 Gorilla gorilla ENSGGOG00000004106 N 0.728
CELF1 Takifugu rubripes ENSTRUG00000000617 N 0.709
ENSCING00000003762 Ciona intestinalis ENSCING00000003762 N 0.704