CELF3 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000003539 T35765_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.829
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.819
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.716
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.706
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000003199 RRM 9 78
ENSCPOP00000003199 RRM 96 164
ENSCPOP00000003199 RRM 382 452

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh3_pm.C_240021 Chlorella NC64A estExt_fgenesh3_pm.C_240021 N 0.000
estExt_fgeneshCV_pg.C_40316 Chlorella vulgaris estExt_fgeneshCV_pg.C_40316 N 0.000
e_gw1.4.423.1 Coccomyxa C 169 e_gw1.4.423.1 N 0.000
gwH.33.76.1 Chlamydomonas reinhardtii gwH.33.76.1 N 0.000
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.000
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.000
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.000