setd1ba (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000060847 T36199_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000080600 RRM 143 210

Links

Other RRM family RBPs
Other Danio rerio RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH81016 Xenopus laevis AAH81016 N 0.838
ENSDARG00000078930 Danio rerio ENSDARG00000078930 N 1.000
ENSMMUG00000012647 Macaca mulatta ENSMMUG00000012647 N 0.824
ENSMUSG00000072629 Mus musculus ENSMUSG00000072629 N 0.824
ENSOANG00000006955 Ornithorhynchus anatinus ENSOANG00000006955 N 0.838
ENSRNOG00000001337 Rattus norvegicus ENSRNOG00000001337 N 0.809
Q66J90 Xenopus laevis Q66J90 N 0.838
SET1B_CHICK Gallus gallus ENSGALG00000004324 N 0.838
setd1a Xenopus tropicalis ENSXETG00000001921 N 0.735
SETD1B Tetraodon nigroviridis ENSTNIG00000009090 N 0.882
setd1b Xenopus tropicalis ENSXETG00000003760 N 0.809
SETD1B Oryctolagus cuniculus ENSOCUG00000017708 N 0.809
SETD1B Oryzias latipes ENSORLG00000008435 N 0.912
SETD1B Takifugu rubripes ENSTRUG00000009533 N 0.897
SETD1B Sus scrofa ENSSSCG00000009806 N 0.809
SETD1B Takifugu rubripes ENSTRUG00000005579 N 0.761
SETD1B Taeniopygia guttata ENSTGUG00000006093 N 0.824
SETD1B Monodelphis domestica ENSMODG00000023734 N 0.853
SETD1B Bos taurus ENSBTAG00000004172 N 0.809
SETD1B Canis familiaris ENSCAFG00000008167 N 0.809
SETD1B Callithrix jacchus ENSCJAG00000016930 N 0.809
SETD1B Equus caballus ENSECAG00000006549 N 0.809
SETD1B Homo sapiens ENSG00000139718 N 0.824
SETD1B Gasterosteus aculeatus ENSGACG00000011872 N 0.757
SETD1B Gasterosteus aculeatus ENSGACG00000017002 N 0.882
SETD1B Gorilla gorilla ENSGGOG00000006715 N 0.824
SETD1B Loxodonta africana ENSLAFG00000026518 N 0.794
SETD1B Meleagris gallopavo ENSMGAG00000004421 N 0.838
SETD1B Anolis carolinensis ENSACAG00000011162 N 0.824
setd1bb Danio rerio ENSDARG00000077244 N 0.706