CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Esrp1
(
Dipodomys ordii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDORG00000011987
T36514_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000011266
RRM
227
296
VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIE
ENSDORP00000011266
RRM
328
400
VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIE
ENSDORP00000011266
RRM
479
519
XXXXXXGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVE
Links
Other
RRM
family RBPs
Other
Dipodomys ordii
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH44002
Xenopus laevis
AAH44002
I
0.773
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.819
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.819
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.764
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.815
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.810
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.810
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.824
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.819
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.819
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.819
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.819
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.810
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.815
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.773
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.810
ESRP1
Myotis lucifugus
ENSMLUG00000001816
N
0.984
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.824
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.819
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.824
ESRP1
Equus caballus
ENSECAG00000000784
I
0.819
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.806
ESRP1
Felis catus
ENSFCAG00000009920
I
0.819
ESRP1
Homo sapiens
ENSG00000104413
I
0.819
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.824
ESRP1
Meleagris gallopavo
ENSMGAG00000012042
I
0.755
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.819
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.708
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.708
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.824
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.815
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.773
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.769
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.759
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.704
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.815