ELAVL4 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000008766 T36801_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		1.000
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		1.000
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		1.000
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.957
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.957
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.957
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.774
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.774
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.774
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.774
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.774
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.774
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000007968 RRM 53 123
ENSEEUP00000007968 RRM 139 207
ENSEEUP00000007968 RRM 304 374

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45039 Xenopus laevis AAH45039 I 0.000
Ame_R006889 Ailuropoda melanoleuca Ame_R006889 I 0.000
ENSPPYG00000012974 Pongo pygmaeus ENSPPYG00000012974 I 0.000
LOC100394606 Callithrix jacchus ENSCJAG00000021516 I 0.000
Q3MHF0_BOVIN Bos taurus ENSBTAG00000006168 I 0.000
Q5ZK78_CHICK Gallus gallus ENSGALG00000009202 I 0.000
RBM45 Homo sapiens ENSG00000155636 I 0.000
RBM45 Canis familiaris ENSCAFG00000013640 I 0.000
rbm45 Xenopus tropicalis ENSXETG00000015007 I 0.000
RBM45 Tursiops truncatus ENSTTRG00000007653 I 0.000
RBM45 Tarsius syrichta ENSTSYG00000007757 I 0.000
RBM45 Sus scrofa ENSSSCG00000015996 I 0.000
Rbm45 Rattus norvegicus ENSRNOG00000010595 I 0.000
RBM45 Pteropus vampyrus ENSPVAG00000010390 I 0.000
RBM45 Pan troglodytes ENSPTRG00000012686 I 0.000
RBM45 Cavia porcellus ENSCPOG00000000684 I 0.000
RBM45 Oryctolagus cuniculus ENSOCUG00000001125 I 0.000
RBM45 Equus caballus ENSECAG00000017129 I 0.000
RBM45 Monodelphis domestica ENSMODG00000009742 I 0.000
RBM45 Macaca mulatta ENSMMUG00000002013 I 0.000
RBM45 Myotis lucifugus ENSMLUG00000005782 I 0.000
RBM45 Gorilla gorilla ENSGGOG00000013981 I 0.000
Rbm45 Mus musculus ENSMUSG00000042369 D 0.000