LOC100394606 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000021516 T35695_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbm45
M209_0.6 		Mus musculus GACGAMV RNAcompete
Ray et al.(2013)
RNCMPT00241 		0.936
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000040062 RRM 31 96
ENSCJAP00000040062 RRM 113 186
ENSCJAP00000040062 RRM 256 316
ENSCJAP00000040062 RRM 398 457
ENSCJAP00000044593 RRM 31 96
ENSCJAP00000044593 RRM 113 186
ENSCJAP00000044593 RRM 257 317
ENSCJAP00000044593 RRM 399 458

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM45 Macaca mulatta ENSMMUG00000002013 I 0.996
RBM45 Pan troglodytes ENSPTRG00000012686 I 0.996
RBM45 Homo sapiens ENSG00000155636 I 0.996
ENSPPYG00000012974 Pongo pygmaeus ENSPPYG00000012974 I 0.996
RBM45 Tarsius syrichta ENSTSYG00000007757 I 0.992
RBM45 Gorilla gorilla ENSGGOG00000013981 I 0.992
RBM45 Oryctolagus cuniculus ENSOCUG00000001125 I 0.989
RBM45 Pteropus vampyrus ENSPVAG00000010390 I 0.985
RBM45 Sus scrofa ENSSSCG00000015996 I 0.981
Ame_R006889 Ailuropoda melanoleuca Ame_R006889 I 0.981
RBM45 Canis familiaris ENSCAFG00000013640 I 0.966
RBM45 Myotis lucifugus ENSMLUG00000005782 I 0.966
Rbm45 Rattus norvegicus ENSRNOG00000010595 I 0.966
RBM45 Cavia porcellus ENSCPOG00000000684 I 0.958
Q3MHF0_BOVIN Bos taurus ENSBTAG00000006168 I 0.958
RBM45 Monodelphis domestica ENSMODG00000009742 I 0.946
Rbm45 Mus musculus ENSMUSG00000042369 D 0.936
RBM45 Dasypus novemcinctus ENSDNOG00000001973 I 0.923
RBM45 Equus caballus ENSECAG00000017129 I 0.874
RBM45 Tursiops truncatus ENSTTRG00000007653 I 0.805
rbm45 Xenopus tropicalis ENSXETG00000015007 I 0.766
Q5ZK78_CHICK Gallus gallus ENSGALG00000009202 I 0.744
AAH45039 Xenopus laevis AAH45039 I 0.738
RBM45 Taeniopygia guttata ENSTGUG00000009116 I 0.733
RBM45 Sorex araneus ENSSARG00000001516 N 0.720