RBM45 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000000684 T35739_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbm45
M209_0.6 		Mus musculus GACGAMV RNAcompete
Ray et al.(2013)
RNCMPT00241 		0.906
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000000606 RRM 35 101
ENSCPOP00000000606 RRM 117 190
ENSCPOP00000000606 RRM 259 319
ENSCPOP00000000606 RRM 398 456

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM45 Tarsius syrichta ENSTSYG00000007757 I 0.966
RBM45 Pan troglodytes ENSPTRG00000012686 I 0.958
ENSPPYG00000012974 Pongo pygmaeus ENSPPYG00000012974 I 0.958
RBM45 Sus scrofa ENSSSCG00000015996 I 0.958
RBM45 Oryctolagus cuniculus ENSOCUG00000001125 I 0.958
Ame_R006889 Ailuropoda melanoleuca Ame_R006889 I 0.958
LOC100394606 Callithrix jacchus ENSCJAG00000021516 I 0.958
RBM45 Pteropus vampyrus ENSPVAG00000010390 I 0.958
RBM45 Homo sapiens ENSG00000155636 I 0.958
RBM45 Macaca mulatta ENSMMUG00000002013 I 0.958
RBM45 Gorilla gorilla ENSGGOG00000013981 I 0.954
RBM45 Myotis lucifugus ENSMLUG00000005782 I 0.951
RBM45 Canis familiaris ENSCAFG00000013640 I 0.943
Q3MHF0_BOVIN Bos taurus ENSBTAG00000006168 I 0.939
RBM45 Monodelphis domestica ENSMODG00000009742 I 0.939
Rbm45 Rattus norvegicus ENSRNOG00000010595 I 0.935
RBM45 Dasypus novemcinctus ENSDNOG00000001973 I 0.916
Rbm45 Mus musculus ENSMUSG00000042369 D 0.906
RBM45 Equus caballus ENSECAG00000017129 I 0.859
RBM45 Tursiops truncatus ENSTTRG00000007653 I 0.782
Q5ZK78_CHICK Gallus gallus ENSGALG00000009202 I 0.756
rbm45 Xenopus tropicalis ENSXETG00000015007 I 0.747
RBM45 Taeniopygia guttata ENSTGUG00000009116 I 0.737
AAH45039 Xenopus laevis AAH45039 I 0.721
RBM45 Sorex araneus ENSSARG00000001516 N 0.706