CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TMEM63A
(
Gorilla gorilla
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGGOG00000000862
T37748_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000000850
RRM
230
265
LFITGLPRDARKETVESHFRDAYPTCEVVDVQLCYN
ENSGGOP00000000850
RRM
335
377
ITEEERHVQDQPLGMAFVTFQEKSMATYILKDFNACKCQSLQC
Links
Other
RRM
family RBPs
Other
Gorilla gorilla
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIOSIBCE036236
Oryza indica
BGIOSIBCE036236
N
0.000
BRADI4G39137
Brachypodium distachyon
BRADI4G39137
N
0.000
GRMZM2G006493
Zea mays
GRMZM2G006493
N
0.000
GSVIVG00019118001
Vitis vinifera
GSVIVG00019118001
N
0.000
LjSGA_052738.1
Lotus japonicus
LjSGA_052738.1
N
0.000
LOC_Os12g18120
Oryza sativa
LOC_Os12g18120
N
0.000
POPTR_0019s08040
Populus trichocarpa
POPTR_0019s08040
N
0.000
SB08G012360
Sorghum bicolor
Sb08g012360
N
0.000