CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CSTF2T
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000002058
T37971_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000019682
RRM
18
88
VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
ENSLAFP00000023917
RRM
18
88
VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
136 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cd36_70640
Candida dubliniensis
Cd36_70640
N
0.000
CTRG_05067
Candida tropicalis
CTRG_05067
N
0.000
gww1.3.1.1553.1
Pichia stipitis
gww1.3.1.1553.1
N
0.000
LELG_05128
Lodderomyces elongisporus
LELG_05128
N
0.000
NOP15
Candida albicans
orf19.7050
N
0.000