CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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gww1.3.1.1553.1
(
Pichia stipitis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
gww1.3.1.1553.1
T53488_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
gww1.3.1.1553.1
RRM
111
181
IYLGRLPQGFQEPEMKKYFSQFGSIINLKLSRNKKTGKSKHYGFIEFENFEIAKIAAESMNNYLIFGHLLR
Links
Other
RRM
family RBPs
Other
Pichia stipitis
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CTRG_05067
Candida tropicalis
CTRG_05067
N
0.789
Cd36_70640
Candida dubliniensis
Cd36_70640
N
0.761
CPAG_04667
Candida parapsilosis
CPAG_04667
N
0.732
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.732
NOP15
Candida albicans
orf19.7050
N
0.718