CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP1
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000001816
T38619_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000001662
RRM
140
209
VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIE
ENSMLUP00000001662
RRM
241
313
VRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIE
ENSMLUP00000001662
RRM
392
432
XXXXXXGRPSGDAFIQMKSADRAYLAAQKCHKKTMKDRYVE
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH44002
Xenopus laevis
AAH44002
I
0.778
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.815
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.806
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.750
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.796
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.806
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.810
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.806
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.815
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.815
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.806
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.806
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.810
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.778
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.801
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.796
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.810
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.815
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.810
Esrp1
Dipodomys ordii
ENSDORG00000011987
N
0.984
ESRP1
Equus caballus
ENSECAG00000000784
I
0.815
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.801
ESRP1
Felis catus
ENSFCAG00000009920
I
0.815
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.810
ESRP1
Homo sapiens
ENSG00000104413
I
0.806
ESRP1
Meleagris gallopavo
ENSMGAG00000012042
I
0.750
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.806
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.810
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.810
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.778
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.755
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.764
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.801