CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF5
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000006471
T38670_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000005912
RRM
1
29
CAFLTYCARDSAIKAQTALHEQKTLPGMA
ENSMLUP00000005912
RRM
83
117
XXXXXXCAFVKFSSHTEAQAAIHALHGSQTMPGAS
ENSMLUP00000005912
RRM
299
369
LFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRUNOL5
Taeniopygia guttata
ENSTGUG00000000514
I
0.731
CELF5
Bos taurus
ENSBTAG00000021774
I
0.749
CELF5
Sus scrofa
ENSSSCG00000013476
I
0.744
CELF5
Pteropus vampyrus
ENSPVAG00000014619
I
0.753
CELF5
Procavia capensis
ENSPCAG00000002170
I
0.740
CELF5
Otolemur garnettii
ENSOGAG00000014161
I
0.735
CELF5
Meleagris gallopavo
ENSMGAG00000001169
I
0.731
CELF5
Loxodonta africana
ENSLAFG00000026387
N
0.867
CELF5
Echinops telfairi
ENSETEG00000016221
I
0.718
CELF5
Equus caballus
ENSECAG00000018055
N
0.894
Celf5
Dipodomys ordii
ENSDORG00000005915
I
0.735
CELF5
Canis familiaris
ENSCAFG00000019263
I
0.749
CELF5
Tursiops truncatus
ENSTTRG00000009625
I
0.753