CELF5 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000002170 T40292_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.763
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000002056 RRM 1 29
ENSPCAP00000002056 RRM 49 117
ENSPCAP00000002056 RRM 314 382

Links

Other RRM family RBPs
Other Procavia capensis RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.965
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.965
CELF5 Canis familiaris ENSCAFG00000019263 I 0.959
CELF5 Bos taurus ENSBTAG00000021774 I 0.953
CELF5 Sus scrofa ENSSSCG00000013476 I 0.948
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.947
Celf5 Dipodomys ordii ENSDORG00000005915 I 0.941
CELF5 Echinops telfairi ENSETEG00000016221 I 0.929
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.924
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.924
celf4 Danio rerio ENSDARG00000070045 I 0.830
CELF6 Cavia porcellus ENSCPOG00000025842 I 0.802
CELF3 Microcebus murinus ENSMICG00000010644 N 0.800
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.777
BRUNOL5 Homo sapiens ENSG00000161082 D 0.773
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.770
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.754
CELF3 Homo sapiens ENSG00000159409 I 0.751
CELF5 Myotis lucifugus ENSMLUG00000006471 N 0.740
CELF5 Equus caballus ENSECAG00000018055 N 0.735
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.727
CELF6 Vicugna pacos ENSVPAG00000002850 N 0.720
ACH69785 Xenopus laevis ACH69785 I 0.716
CELF5 Loxodonta africana ENSLAFG00000026387 N 0.712
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.706
CELF5 Oryzias latipes ENSORLG00000004600 I 0.701