CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BRUNOL5
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000000514
T41833_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
BRUNOL5
M157_0.6
Homo sapiens
UGUGUKK
RNAcompete
Ray et al.(2013)
RNCMPT00166
0.768
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000000526
RRM
1
30
GCAFLTYCARDSAIKAQTALHEQKTLPGMA
ENSTGUP00000000526
RRM
50
118
LFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS
ENSTGUP00000000526
RRM
316
386
LFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF5
Meleagris gallopavo
ENSMGAG00000001169
I
1.000
CELF5
Canis familiaris
ENSCAFG00000019263
I
0.965
CELF5
Pteropus vampyrus
ENSPVAG00000014619
I
0.959
CELF5
Tursiops truncatus
ENSTTRG00000009625
I
0.959
CELF5
Sus scrofa
ENSSSCG00000013476
I
0.953
CELF5
Bos taurus
ENSBTAG00000021774
I
0.947
CELF5
Otolemur garnettii
ENSOGAG00000014161
I
0.941
Celf5
Dipodomys ordii
ENSDORG00000005915
I
0.935
CELF5
Procavia capensis
ENSPCAG00000002170
I
0.924
CELF5
Echinops telfairi
ENSETEG00000016221
I
0.918
celf4
Danio rerio
ENSDARG00000070045
I
0.888
CELF6
Cavia porcellus
ENSCPOG00000025842
I
0.825
CELF3
Takifugu rubripes
ENSTRUG00000012064
I
0.809
CELF3
Microcebus murinus
ENSMICG00000010644
N
0.806
Ame_R011948
Ailuropoda melanoleuca
Ame_R011948
I
0.781
BRUNOL5
Homo sapiens
ENSG00000161082
D
0.776
CELF3
Homo sapiens
ENSG00000159409
I
0.767
CELF5
Pan troglodytes
ENSPTRG00000010259
I
0.752
CELF3
Macaca mulatta
ENSMMUG00000016952
I
0.742
CELF5
Oryzias latipes
ENSORLG00000004600
I
0.738
ACH69785
Xenopus laevis
ACH69785
I
0.738
CELF5
Equus caballus
ENSECAG00000018055
N
0.737
celf5
Danio rerio
ENSDARG00000071375
I
0.733
CELF5
Myotis lucifugus
ENSMLUG00000006471
N
0.731
CELF4
Oryzias latipes
ENSORLG00000008913
I
0.730
celf5
Xenopus tropicalis
ENSXETG00000014344
I
0.729
CELF4
Oryctolagus cuniculus
ENSOCUG00000024790
I
0.729
CELF4
Loxodonta africana
ENSLAFG00000021352
I
0.729
celf4
Xenopus tropicalis
ENSXETG00000020486
I
0.724
Celf4
Mus musculus
ENSMUSG00000024268
I
0.724
CELF5
Loxodonta africana
ENSLAFG00000026387
N
0.713
CELF4
Takifugu rubripes
ENSTRUG00000015481
I
0.710
CELF6
Monodelphis domestica
ENSMODG00000001784
I
0.700